Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ebf3O08791 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ebf3O08791 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ebf3O08791 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ebf3O08791 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ebf3O08791 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ebf3O08791 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ebf3O08791 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ebf3O08791 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ebf3O08791 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.83■■□□□ 1.57
Ebf3O08791 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ebf3O08791 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ebf3O08791 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ebf3O08791 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ebf3O08791 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ebf3O08791 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.81■■□□□ 1.56
Ebf3O08791 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.8■■□□□ 1.56
Ebf3O08791 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ebf3O08791 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Ebf3O08791 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Ebf3O08791 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ebf3O08791 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ebf3O08791 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ebf3O08791 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.77■■□□□ 1.56
Ebf3O08791 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ebf3O08791 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ebf3O08791 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ebf3O08791 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ebf3O08791 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ebf3O08791 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ebf3O08791 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ebf3O08791 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.75■■□□□ 1.55
Ebf3O08791 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ebf3O08791 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ebf3O08791 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Ebf3O08791 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.73■■□□□ 1.55
Ebf3O08791 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ebf3O08791 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.73■■□□□ 1.55
Ebf3O08791 Gm11175-201ENSMUST00000116172 543 ntBASIC24.72■■□□□ 1.55
Ebf3O08791 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ebf3O08791 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.71■■□□□ 1.55
Ebf3O08791 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ebf3O08791 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Ebf3O08791 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ebf3O08791 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ebf3O08791 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ebf3O08791 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ebf3O08791 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Ebf3O08791 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ebf3O08791 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ebf3O08791 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ebf3O08791 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ebf3O08791 Gm30023-201ENSMUST00000197970 889 ntBASIC24.67■■□□□ 1.54
Ebf3O08791 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ebf3O08791 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ebf3O08791 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 Mir6538-201ENSMUST00000183713 110 ntBASIC24.66■■□□□ 1.54
Ebf3O08791 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ebf3O08791 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ebf3O08791 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Ebf3O08791 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ebf3O08791 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ebf3O08791 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ebf3O08791 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ebf3O08791 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ebf3O08791 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ebf3O08791 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.62■■□□□ 1.53
Ebf3O08791 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.61■■□□□ 1.53
Ebf3O08791 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ebf3O08791 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ebf3O08791 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Ebf3O08791 Amer2-203ENSMUST00000225247 2662 ntBASIC24.59■■□□□ 1.53
Ebf3O08791 Gm6311-201ENSMUST00000073790 878 ntBASIC24.59■■□□□ 1.53
Ebf3O08791 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Ebf3O08791 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ebf3O08791 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.58■■□□□ 1.53
Ebf3O08791 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.57■■□□□ 1.52
Ebf3O08791 Particl-201ENSMUST00000205370 1560 ntBASIC24.56■■□□□ 1.52
Ebf3O08791 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ebf3O08791 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.56■■□□□ 1.52
Ebf3O08791 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ebf3O08791 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ebf3O08791 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ebf3O08791 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ebf3O08791 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ebf3O08791 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.55■■□□□ 1.52
Ebf3O08791 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ebf3O08791 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ebf3O08791 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Ebf3O08791 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ebf3O08791 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ebf3O08791 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ebf3O08791 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ebf3O08791 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.49■■□□□ 1.51
Ebf3O08791 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ebf3O08791 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ebf3O08791 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms