Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3yl1O08641 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3yl1O08641 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3yl1O08641 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3yl1O08641 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3yl1O08641 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3yl1O08641 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Sh3yl1O08641 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Sh3yl1O08641 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3yl1O08641 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3yl1O08641 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3yl1O08641 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Sh3yl1O08641 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sh3yl1O08641 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.64■■□□□ 1.21
Sh3yl1O08641 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3yl1O08641 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3yl1O08641 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3yl1O08641 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.63■■□□□ 1.21
Sh3yl1O08641 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3yl1O08641 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3yl1O08641 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Sh3yl1O08641 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3yl1O08641 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Sh3yl1O08641 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3yl1O08641 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3yl1O08641 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3yl1O08641 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Sh3yl1O08641 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3yl1O08641 Gm6821-201ENSMUST00000107540 542 ntBASIC22.6■■□□□ 1.21
Sh3yl1O08641 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Sh3yl1O08641 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.6■■□□□ 1.21
Sh3yl1O08641 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3yl1O08641 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3yl1O08641 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3yl1O08641 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Sh3yl1O08641 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3yl1O08641 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3yl1O08641 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3yl1O08641 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.58■■□□□ 1.21
Sh3yl1O08641 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3yl1O08641 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3yl1O08641 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3yl1O08641 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3yl1O08641 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3yl1O08641 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3yl1O08641 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3yl1O08641 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3yl1O08641 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3yl1O08641 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3yl1O08641 Nkain2-201ENSMUST00000092602 558 ntBASIC22.53■■□□□ 1.2
Sh3yl1O08641 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.52■■□□□ 1.2
Sh3yl1O08641 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3yl1O08641 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3yl1O08641 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3yl1O08641 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3yl1O08641 Gm8503-201ENSMUST00000118131 455 ntBASIC22.51■■□□□ 1.19
Sh3yl1O08641 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3yl1O08641 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3yl1O08641 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3yl1O08641 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sh3yl1O08641 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3yl1O08641 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3yl1O08641 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3yl1O08641 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.49■■□□□ 1.19
Sh3yl1O08641 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sh3yl1O08641 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3yl1O08641 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3yl1O08641 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Sh3yl1O08641 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3yl1O08641 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3yl1O08641 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3yl1O08641 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Sh3yl1O08641 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Sh3yl1O08641 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3yl1O08641 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3yl1O08641 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3yl1O08641 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
Sh3yl1O08641 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3yl1O08641 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3yl1O08641 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Sh3yl1O08641 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3yl1O08641 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3yl1O08641 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3yl1O08641 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3yl1O08641 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
Sh3yl1O08641 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3yl1O08641 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3yl1O08641 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3yl1O08641 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Sh3yl1O08641 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.41■■□□□ 1.18
Sh3yl1O08641 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.4■■□□□ 1.18
Sh3yl1O08641 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.39■■□□□ 1.17
Sh3yl1O08641 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3yl1O08641 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.39■■□□□ 1.17
Sh3yl1O08641 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3yl1O08641 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.38■■□□□ 1.17
Sh3yl1O08641 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3yl1O08641 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3yl1O08641 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sh3yl1O08641 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms