Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13n-4A0A0G2JG01 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13n-4A0A0G2JG01 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav13n-4A0A0G2JG01 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav13n-4A0A0G2JG01 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav13n-4A0A0G2JG01 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav13n-4A0A0G2JG01 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav13n-4A0A0G2JG01 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav13n-4A0A0G2JG01 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Trav13n-4A0A0G2JG01 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trav13n-4A0A0G2JG01 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav13n-4A0A0G2JG01 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav13n-4A0A0G2JG01 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav13n-4A0A0G2JG01 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trav13n-4A0A0G2JG01 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav13n-4A0A0G2JG01 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13n-4A0A0G2JG01 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13n-4A0A0G2JG01 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13n-4A0A0G2JG01 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13n-4A0A0G2JG01 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13n-4A0A0G2JG01 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13n-4A0A0G2JG01 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav13n-4A0A0G2JG01 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav13n-4A0A0G2JG01 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav13n-4A0A0G2JG01 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav13n-4A0A0G2JG01 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trav13n-4A0A0G2JG01 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav13n-4A0A0G2JG01 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav13n-4A0A0G2JG01 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav13n-4A0A0G2JG01 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav13n-4A0A0G2JG01 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav13n-4A0A0G2JG01 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav13n-4A0A0G2JG01 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav13n-4A0A0G2JG01 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav13n-4A0A0G2JG01 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav13n-4A0A0G2JG01 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav13n-4A0A0G2JG01 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.06■□□□□ 0.64
Trav13n-4A0A0G2JG01 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav13n-4A0A0G2JG01 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav13n-4A0A0G2JG01 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav13n-4A0A0G2JG01 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav13n-4A0A0G2JG01 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav13n-4A0A0G2JG01 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav13n-4A0A0G2JG01 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav13n-4A0A0G2JG01 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.04■□□□□ 0.64
Trav13n-4A0A0G2JG01 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav13n-4A0A0G2JG01 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13n-4A0A0G2JG01 Nkain2-201ENSMUST00000092602 558 ntBASIC19.04■□□□□ 0.64
Trav13n-4A0A0G2JG01 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13n-4A0A0G2JG01 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav13n-4A0A0G2JG01 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13n-4A0A0G2JG01 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.02■□□□□ 0.64
Trav13n-4A0A0G2JG01 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13n-4A0A0G2JG01 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav13n-4A0A0G2JG01 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trav13n-4A0A0G2JG01 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.01■□□□□ 0.63
Trav13n-4A0A0G2JG01 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trav13n-4A0A0G2JG01 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trav13n-4A0A0G2JG01 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13n-4A0A0G2JG01 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13n-4A0A0G2JG01 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13n-4A0A0G2JG01 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13n-4A0A0G2JG01 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13n-4A0A0G2JG01 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13n-4A0A0G2JG01 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.98■□□□□ 0.63
Trav13n-4A0A0G2JG01 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13n-4A0A0G2JG01 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13n-4A0A0G2JG01 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13n-4A0A0G2JG01 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13n-4A0A0G2JG01 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13n-4A0A0G2JG01 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13n-4A0A0G2JG01 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.97■□□□□ 0.63
Trav13n-4A0A0G2JG01 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav13n-4A0A0G2JG01 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Trav13n-4A0A0G2JG01 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav13n-4A0A0G2JG01 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav13n-4A0A0G2JG01 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav13n-4A0A0G2JG01 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav13n-4A0A0G2JG01 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav13n-4A0A0G2JG01 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav13n-4A0A0G2JG01 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13n-4A0A0G2JG01 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13n-4A0A0G2JG01 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav13n-4A0A0G2JG01 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13n-4A0A0G2JG01 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13n-4A0A0G2JG01 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13n-4A0A0G2JG01 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms