Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Brf2Q3UAW9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brf2Q3UAW9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.31■□□□□ 0.2
Brf2Q3UAW9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brf2Q3UAW9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Gm29257-201ENSMUST00000186115 639 ntBASIC16.3■□□□□ 0.2
Brf2Q3UAW9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.3■□□□□ 0.2
Brf2Q3UAW9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brf2Q3UAW9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brf2Q3UAW9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms