Protein–RNA interactions for Protein: Q04304

YMR090W, UPF0659 protein YMR090W, yeast

Known RBP Predictions only

Length 227 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR090W	Q04304	PCF11	YDR228C	1881 nt		-1.16	□□□□□ -2.59
YMR090W	Q04304	CUP1-1	YHR053C	186 nt		-1.16	□□□□□ -2.6
YMR090W	Q04304	CUP1-2	YHR055C	186 nt		-1.16	□□□□□ -2.6
YMR090W	Q04304	SGF11	YPL047W	300 nt		-1.16	□□□□□ -2.6
YMR090W	Q04304	YPR092W	YPR092W	306 nt		-1.16	□□□□□ -2.6
YMR090W	Q04304	YCR001W	YCR001W	315 nt		-1.17	□□□□□ -2.6
YMR090W	Q04304	HUR1	YGL168W	333 nt		-1.17	□□□□□ -2.6
YMR090W	Q04304	TAR1	YLR154W-C	375 nt		-1.17	□□□□□ -2.6
YMR090W	Q04304	YNL067W-B	YNL067W-B	141 nt		-1.17	□□□□□ -2.6
YMR090W	Q04304	POP7	YBR167C	423 nt		-1.17	□□□□□ -2.6
YMR090W	Q04304	MRPS8	YMR158W	468 nt		-1.19	□□□□□ -2.6
YMR090W	Q04304	TIM13	YGR181W	318 nt		-1.2	□□□□□ -2.6
YMR090W	Q04304	EST1	YLR233C	2100 nt		-1.2	□□□□□ -2.6
YMR090W	Q04304	YGL230C	YGL230C	444 nt		-1.21	□□□□□ -2.6
YMR090W	Q04304	YIL071W-A	YIL071W-A	477 nt		-1.21	□□□□□ -2.6
YMR090W	Q04304	YDL007C-A	YDL007C-A	258 nt		-1.22	□□□□□ -2.6
YMR090W	Q04304	CMC1	YKL137W	336 nt		-1.22	□□□□□ -2.6
YMR090W	Q04304	YPT6	YLR262C	648 nt		-1.22	□□□□□ -2.6
YMR090W	Q04304	YHR138C	YHR138C	345 nt		-1.24	□□□□□ -2.61
YMR090W	Q04304	snR36	snR36	182 nt		-1.24	□□□□□ -2.61
YMR090W	Q04304	SCEI	Q0160	708 nt		-1.26	□□□□□ -2.61
YMR090W	Q04304	YGR025W	YGR025W	303 nt		-1.27	□□□□□ -2.61
YMR090W	Q04304	BLI1	YKL061W	342 nt		-1.27	□□□□□ -2.61
YMR090W	Q04304	YLR282C	YLR282C	342 nt		-1.27	□□□□□ -2.61
YMR090W	Q04304	YLR041W	YLR041W	321 nt		-1.28	□□□□□ -2.61
YMR090W	Q04304	YNL058C	YNL058C	951 nt		-1.28	□□□□□ -2.61
YMR090W	Q04304	snR9	snR9	187 nt		-1.29	□□□□□ -2.62
YMR090W	Q04304	MND1	YGL183C	660 nt		-1.29	□□□□□ -2.62
YMR090W	Q04304	HMLALPHA2	YCL067C	633 nt		-1.3	□□□□□ -2.62
YMR090W	Q04304	MATALPHA2	YCR039C	633 nt		-1.3	□□□□□ -2.62
YMR090W	Q04304	HMRA2	YCR096C	360 nt		-1.3	□□□□□ -2.62
YMR090W	Q04304	tA(UGC)Q	tA(UGC)Q	76 nt		-1.3	□□□□□ -2.62
YMR090W	Q04304	YMR158W-B	YMR158W-B	321 nt		-1.3	□□□□□ -2.62
YMR090W	Q04304	ZEO1	YOL109W	342 nt		-1.3	□□□□□ -2.62
YMR090W	Q04304	YML007C-A	YML007C-A	111 nt		-1.31	□□□□□ -2.62
YMR090W	Q04304	FYV7	YLR068W	456 nt		-1.32	□□□□□ -2.62
YMR090W	Q04304	GRX5	YPL059W	453 nt		-1.32	□□□□□ -2.62
YMR090W	Q04304	YBR072C-A	YBR072C-A	162 nt		-1.32	□□□□□ -2.62
YMR090W	Q04304	YCR100C	YCR100C	951 nt		-1.33	□□□□□ -2.62
YMR090W	Q04304	SNU13	YEL026W	381 nt		-1.33	□□□□□ -2.62
YMR090W	Q04304	YMR254C	YMR254C	309 nt		-1.33	□□□□□ -2.62
YMR090W	Q04304	YBL062W	YBL062W	381 nt		-1.33	□□□□□ -2.62
YMR090W	Q04304	YER175W-A	YER175W-A	165 nt		-1.34	□□□□□ -2.62
YMR090W	Q04304	COG6	YNL041C	2520 nt		-1.34	□□□□□ -2.62
YMR090W	Q04304	YHL041W	YHL041W	450 nt		-1.35	□□□□□ -2.63
YMR090W	Q04304	YJL026C-A	YJL026C-A	222 nt		-1.36	□□□□□ -2.63
YMR090W	Q04304	RPS25B	YLR333C	327 nt		-1.36	□□□□□ -2.63
YMR090W	Q04304	YJL020W-A	YJL020W-A	258 nt		-1.38	□□□□□ -2.63
YMR090W	Q04304	YPR002C-A	YPR002C-A	198 nt		-1.41	□□□□□ -2.64
YMR090W	Q04304	YPL060C-A	YPL060C-A	3315 nt		-1.42	□□□□□ -2.64
YMR090W	Q04304	YDL011C	YDL011C	324 nt		-1.42	□□□□□ -2.64
YMR090W	Q04304	AGA2	YGL032C	264 nt		-1.43	□□□□□ -2.64
YMR090W	Q04304	YLR334C	YLR334C	381 nt		-1.43	□□□□□ -2.64
YMR090W	Q04304	TSC3	YBR058C-A	243 nt		-1.43	□□□□□ -2.64
YMR090W	Q04304	YER079W	YER079W	633 nt		-1.44	□□□□□ -2.64
YMR090W	Q04304	YPL229W	YPL229W	621 nt		-1.44	□□□□□ -2.64
YMR090W	Q04304	YKL044W	YKL044W	321 nt		-1.45	□□□□□ -2.64
YMR090W	Q04304	YNL303W	YNL303W	348 nt		-1.45	□□□□□ -2.64
YMR090W	Q04304	YOR161W-A	YOR161W-A	81 nt		-1.46	□□□□□ -2.64
YMR090W	Q04304	YDR366C	YDR366C	399 nt		-1.47	□□□□□ -2.64
YMR090W	Q04304	YIL029C	YIL029C	429 nt		-1.47	□□□□□ -2.64
YMR090W	Q04304	YJR087W	YJR087W	351 nt		-1.49	□□□□□ -2.65
YMR090W	Q04304	snR161	snR161	161 nt		-1.49	□□□□□ -2.65
YMR090W	Q04304	YLR412C-A	YLR412C-A	207 nt		-1.5	□□□□□ -2.65
YMR090W	Q04304	YML100W-A	YML100W-A	174 nt		-1.5	□□□□□ -2.65
YMR090W	Q04304	YBR223W-A	YBR223W-A	120 nt		-1.5	□□□□□ -2.65
YMR090W	Q04304	YDR354C-A	YDR354C-A	144 nt		-1.51	□□□□□ -2.65
YMR090W	Q04304	YCR038W-A	YCR038W-A	126 nt		-1.53	□□□□□ -2.65
YMR090W	Q04304	YDL016C	YDL016C	303 nt		-1.53	□□□□□ -2.65
YMR090W	Q04304	YDR426C	YDR426C	378 nt		-1.53	□□□□□ -2.65
YMR090W	Q04304	YBL071C	YBL071C	309 nt		-1.54	□□□□□ -2.66
YMR090W	Q04304	PAU9	YBL108C-A	129 nt		-1.54	□□□□□ -2.66
YMR090W	Q04304	YPL068C	YPL068C	882 nt		-1.54	□□□□□ -2.66
YMR090W	Q04304	YHR007C-A	YHR007C-A	216 nt		-1.55	□□□□□ -2.66
YMR090W	Q04304	YIR021W-A	YIR021W-A	213 nt		-1.55	□□□□□ -2.66
YMR090W	Q04304	YLR264C-A	YLR264C-A	117 nt		-1.55	□□□□□ -2.66
YMR090W	Q04304	YGL123C-A	YGL123C-A	231 nt		-1.56	□□□□□ -2.66
YMR090W	Q04304	YKL083W	YKL083W	615 nt		-1.58	□□□□□ -2.66
YMR090W	Q04304	YJL182C	YJL182C	318 nt		-1.59	□□□□□ -2.66
YMR090W	Q04304	YHR130C	YHR130C	336 nt		-1.6	□□□□□ -2.67
YMR090W	Q04304	YKL100W-A	YKL100W-A	90 nt		-1.6	□□□□□ -2.67
YMR090W	Q04304	SDH6	YDR379C-A	240 nt		-1.64	□□□□□ -2.67
YMR090W	Q04304	YAR029W	YAR029W	225 nt		-1.64	□□□□□ -2.67
YMR090W	Q04304	YOR192C-C	YOR192C-C	237 nt		-1.65	□□□□□ -2.67
YMR090W	Q04304	YIL002W-A	YIL002W-A	210 nt		-1.66	□□□□□ -2.68
YMR090W	Q04304	YEL020C-B	YEL020C-B	198 nt		-1.67	□□□□□ -2.68
YMR090W	Q04304	AIM29	YKR074W	468 nt		-1.67	□□□□□ -2.68
YMR090W	Q04304	YER084W-A	YER084W-A	513 nt		-1.68	□□□□□ -2.68
YMR090W	Q04304	PCC1	YKR095W-A	267 nt		-1.68	□□□□□ -2.68
YMR090W	Q04304	YGR174W-A	YGR174W-A	87 nt		-1.71	□□□□□ -2.68
YMR090W	Q04304	YLR269C	YLR269C	351 nt		-1.72	□□□□□ -2.68
YMR090W	Q04304	TAH1	YCR060W	336 nt		-1.73	□□□□□ -2.69
YMR090W	Q04304	tP(UGG)Q	tP(UGG)Q	72 nt		-1.75	□□□□□ -2.69
YMR090W	Q04304	YLR456W	YLR456W	615 nt		-1.75	□□□□□ -2.69
YMR090W	Q04304	YFL063W	YFL063W	456 nt		-1.76	□□□□□ -2.69
YMR090W	Q04304	snR49	snR49	165 nt		-1.76	□□□□□ -2.69
YMR090W	Q04304	YFL012W	YFL012W	447 nt		-1.78	□□□□□ -2.69
YMR090W	Q04304	YGL182C	YGL182C	324 nt		-1.78	□□□□□ -2.69
YMR090W	Q04304	YER053C-A	YER053C-A	114 nt		-1.79	□□□□□ -2.7
YMR090W	Q04304	YLR154W-F	YLR154W-F	141 nt		-1.8	□□□□□ -2.7

Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms