Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 WAR1YML076C 2835 nt1.47□□□□□ -2.17
SLD3P53135 tM(CAU)Q1tM(CAU)Q1 76 nt1.46□□□□□ -2.18
SLD3P53135 APQ12YIL040W 417 nt1.46□□□□□ -2.18
SLD3P53135 EAF1YDR359C 2949 nt1.46□□□□□ -2.18
SLD3P53135 YDL196WYDL196W 330 nt1.45□□□□□ -2.18
SLD3P53135 ISD11YER048W-A 285 nt1.45□□□□□ -2.18
SLD3P53135 BLI1YKL061W 342 nt1.45□□□□□ -2.18
SLD3P53135 COA6YMR244C-A 315 nt1.45□□□□□ -2.18
SLD3P53135 STB6YKL072W 2301 nt1.45□□□□□ -2.18
SLD3P53135 NUP192YJL039C 5052 nt1.45□□□□□ -2.18
SLD3P53135 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
SLD3P53135 YMR046W-AYMR046W-A 129 nt1.44□□□□□ -2.18
SLD3P53135 NUP157YER105C 4176 nt1.44□□□□□ -2.18
SLD3P53135 SEC3YER008C 4011 nt1.43□□□□□ -2.18
SLD3P53135 YNL211CYNL211C 261 nt1.42□□□□□ -2.18
SLD3P53135 PET127YOR017W 2403 nt1.42□□□□□ -2.18
SLD3P53135 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
SLD3P53135 APL1YJR005W 2103 nt1.42□□□□□ -2.18
SLD3P53135 YAL067W-AYAL067W-A 228 nt1.41□□□□□ -2.18
SLD3P53135 YNL097C-BYNL097C-B 123 nt1.41□□□□□ -2.18
SLD3P53135 HKR1YDR420W 5409 nt1.41□□□□□ -2.18
SLD3P53135 SMC1YFL008W 3678 nt1.41□□□□□ -2.18
SLD3P53135 PIK1YNL267W 3201 nt1.4□□□□□ -2.19
SLD3P53135 ANS1YHR126C 480 nt1.39□□□□□ -2.19
SLD3P53135 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
SLD3P53135 NOP9YJL010C 2001 nt1.39□□□□□ -2.19
SLD3P53135 YDR406W-AYDR406W-A 246 nt1.38□□□□□ -2.19
SLD3P53135 CMC4YMR194C-B 222 nt1.38□□□□□ -2.19
SLD3P53135 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
SLD3P53135 PAA1YDR071C 576 nt1.37□□□□□ -2.19
SLD3P53135 BRR2YER172C 6492 nt1.36□□□□□ -2.19
SLD3P53135 ULI1YFR026C 510 nt1.36□□□□□ -2.19
SLD3P53135 RSM22YKL155C 1887 nt1.36□□□□□ -2.19
SLD3P53135 YOR345CYOR345C 351 nt1.36□□□□□ -2.19
SLD3P53135 SSK2YNR031C 4740 nt1.35□□□□□ -2.19
SLD3P53135 PAM16YJL104W 450 nt1.35□□□□□ -2.19
SLD3P53135 YPL044CYPL044C 549 nt1.35□□□□□ -2.19
SLD3P53135 KAP120YPL125W 3099 nt1.35□□□□□ -2.19
SLD3P53135 GEA2YEL022W 4380 nt1.34□□□□□ -2.19
SLD3P53135 YBR131C-AYBR131C-A 90 nt1.34□□□□□ -2.19
SLD3P53135 HAL9YOL089C 3093 nt1.33□□□□□ -2.2
SLD3P53135 TTI1YKL033W 3117 nt1.33□□□□□ -2.2
SLD3P53135 MSH3YCR092C 3057 nt1.33□□□□□ -2.2
SLD3P53135 CAT8YMR280C 4302 nt1.32□□□□□ -2.2
SLD3P53135 ASE1YOR058C 2658 nt1.32□□□□□ -2.2
SLD3P53135 YIL134C-AYIL134C-A 204 nt1.31□□□□□ -2.2
SLD3P53135 RPS30BYOR182C 192 nt1.31□□□□□ -2.2
SLD3P53135 YDL185C-AYDL185C-A 228 nt1.3□□□□□ -2.2
SLD3P53135 YFR012W-AYFR012W-A 87 nt1.3□□□□□ -2.2
SLD3P53135 RPL26BYGR034W 384 nt1.3□□□□□ -2.2
SLD3P53135 COX12YLR038C 252 nt1.29□□□□□ -2.2
SLD3P53135 YEL014CYEL014C 306 nt1.27□□□□□ -2.21
SLD3P53135 LAA1YJL207C 6045 nt1.26□□□□□ -2.21
SLD3P53135 YCR018C-AYCR018C-A 255 nt1.26□□□□□ -2.21
SLD3P53135 snR46snR46 197 nt1.26□□□□□ -2.21
SLD3P53135 COY1YKL179C 2040 nt1.25□□□□□ -2.21
SLD3P53135 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
SLD3P53135 YGL123C-AYGL123C-A 231 nt1.24□□□□□ -2.21
SLD3P53135 COX5BYIL111W 456 nt1.24□□□□□ -2.21
SLD3P53135 YLR282CYLR282C 342 nt1.23□□□□□ -2.21
SLD3P53135 CDC31YOR257W 486 nt1.23□□□□□ -2.21
SLD3P53135 PRP16YKR086W 3216 nt1.23□□□□□ -2.21
SLD3P53135 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
SLD3P53135 PMP1YCR024C-A 123 nt1.22□□□□□ -2.21
SLD3P53135 YIL002W-AYIL002W-A 210 nt1.22□□□□□ -2.21
SLD3P53135 YIL020C-AYIL020C-A 339 nt1.22□□□□□ -2.21
SLD3P53135 YOR161W-AYOR161W-A 81 nt1.22□□□□□ -2.21
SLD3P53135 YKL100W-AYKL100W-A 90 nt1.21□□□□□ -2.22
SLD3P53135 YNL337WYNL337W 255 nt1.21□□□□□ -2.22
SLD3P53135 snR190snR190 190 nt1.21□□□□□ -2.22
SLD3P53135 NST1YNL091W 3723 nt1.2□□□□□ -2.22
SLD3P53135 YCR038W-AYCR038W-A 126 nt1.2□□□□□ -2.22
SLD3P53135 RAD9YDR217C 3930 nt1.2□□□□□ -2.22
SLD3P53135 BFR2YDR299W 1605 nt1.18□□□□□ -2.22
SLD3P53135 SEC8YPR055W 3198 nt1.18□□□□□ -2.22
SLD3P53135 YER053C-AYER053C-A 114 nt1.17□□□□□ -2.22
SLD3P53135 YML002WYML002W 2214 nt1.16□□□□□ -2.22
SLD3P53135 YJL150WYJL150W 303 nt1.15□□□□□ -2.23
SLD3P53135 YLR041WYLR041W 321 nt1.15□□□□□ -2.23
SLD3P53135 SPT7YBR081C 3999 nt1.15□□□□□ -2.23
SLD3P53135 YJL182CYJL182C 318 nt1.14□□□□□ -2.23
SLD3P53135 YLR399W-AYLR399W-A 105 nt1.14□□□□□ -2.23
SLD3P53135 YPR160W-AYPR160W-A 81 nt1.14□□□□□ -2.23
SLD3P53135 YDL073WYDL073W 2955 nt1.14□□□□□ -2.23
SLD3P53135 snR52snR52 92 nt1.12□□□□□ -2.23
SLD3P53135 tH(GUG)E1tH(GUG)E1 72 nt1.11□□□□□ -2.23
SLD3P53135 tH(GUG)E2tH(GUG)E2 72 nt1.11□□□□□ -2.23
SLD3P53135 tH(GUG)G1tH(GUG)G1 72 nt1.11□□□□□ -2.23
SLD3P53135 tH(GUG)G2tH(GUG)G2 72 nt1.11□□□□□ -2.23
SLD3P53135 tH(GUG)HtH(GUG)H 72 nt1.11□□□□□ -2.23
SLD3P53135 tH(GUG)KtH(GUG)K 72 nt1.11□□□□□ -2.23
SLD3P53135 tH(GUG)MtH(GUG)M 72 nt1.11□□□□□ -2.23
SLD3P53135 IML1YJR138W 4755 nt1.11□□□□□ -2.23
SLD3P53135 FYV10YIL097W 1551 nt1.1□□□□□ -2.23
SLD3P53135 YEL073CYEL073C 324 nt1.1□□□□□ -2.23
SLD3P53135 PRP39YML046W 1890 nt1.09□□□□□ -2.23
SLD3P53135 YGR130CYGR130C 2451 nt1.09□□□□□ -2.23
SLD3P53135 PRP42YDR235W 1635 nt1.09□□□□□ -2.23
SLD3P53135 YLR342W-AYLR342W-A 174 nt1.09□□□□□ -2.23
SLD3P53135 SCC2YDR180W 4482 nt1.09□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms