Protein–RNA interactions for Protein: P32497

NIP1, Eukaryotic translation initiation factor 3 subunit C, yeastyeast

Known RBP Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP1P32497 MCM10YIL150C 1716 nt0.96□□□□□ -2.26
NIP1P32497 HTL1YCR020W-B 237 nt0.96□□□□□ -2.26
NIP1P32497 YDR183C-AYDR183C-A 258 nt0.96□□□□□ -2.26
NIP1P32497 CSE2YNR010W 450 nt0.96□□□□□ -2.26
NIP1P32497 YOR218CYOR218C 420 nt0.96□□□□□ -2.26
NIP1P32497 PAN2YGL094C 3348 nt0.95□□□□□ -2.26
NIP1P32497 YFL063WYFL063W 456 nt0.95□□□□□ -2.26
NIP1P32497 ALG13YGL047W 609 nt0.95□□□□□ -2.26
NIP1P32497 PAU12YGR294W 363 nt0.95□□□□□ -2.26
NIP1P32497 PAU24YBR301W 363 nt0.95□□□□□ -2.26
NIP1P32497 RPS27BYHR021C 249 nt0.94□□□□□ -2.26
NIP1P32497 YJL120WYJL120W 324 nt0.94□□□□□ -2.26
NIP1P32497 COG8YML071C 1824 nt0.94□□□□□ -2.26
NIP1P32497 YHL042WYHL042W 453 nt0.93□□□□□ -2.26
NIP1P32497 YMR321CYMR321C 318 nt0.93□□□□□ -2.26
NIP1P32497 STE5YDR103W 2754 nt0.92□□□□□ -2.26
NIP1P32497 YDL196WYDL196W 330 nt0.92□□□□□ -2.26
NIP1P32497 Q0142Q0142 177 nt0.92□□□□□ -2.26
NIP1P32497 RPL39YJL189W 156 nt0.92□□□□□ -2.26
NIP1P32497 CMC4YMR194C-B 222 nt0.92□□□□□ -2.26
NIP1P32497 YNL211CYNL211C 261 nt0.91□□□□□ -2.26
NIP1P32497 YPL044CYPL044C 549 nt0.91□□□□□ -2.26
NIP1P32497 tF(GAA)BtF(GAA)B 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)FtF(GAA)F 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)GtF(GAA)G 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)H1tF(GAA)H1 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)H2tF(GAA)H2 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)MtF(GAA)M 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)P1tF(GAA)P1 73 nt0.9□□□□□ -2.27
NIP1P32497 tF(GAA)P2tF(GAA)P2 73 nt0.9□□□□□ -2.27
NIP1P32497 YMR031W-AYMR031W-A 327 nt0.9□□□□□ -2.27
NIP1P32497 RKR1YMR247C 4689 nt0.89□□□□□ -2.27
NIP1P32497 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
NIP1P32497 PAA1YDR071C 576 nt0.88□□□□□ -2.27
NIP1P32497 ISD11YER048W-A 285 nt0.88□□□□□ -2.27
NIP1P32497 YOR282WYOR282W 321 nt0.88□□□□□ -2.27
NIP1P32497 NOP9YJL010C 2001 nt0.88□□□□□ -2.27
NIP1P32497 YNL028WYNL028W 318 nt0.87□□□□□ -2.27
NIP1P32497 MYO1YHR023W 5787 nt0.87□□□□□ -2.27
NIP1P32497 YGR069WYGR069W 336 nt0.85□□□□□ -2.27
NIP1P32497 RAD61YDR014W 1944 nt0.85□□□□□ -2.27
NIP1P32497 YDR354C-AYDR354C-A 144 nt0.84□□□□□ -2.27
NIP1P32497 YFR012W-AYFR012W-A 87 nt0.84□□□□□ -2.27
NIP1P32497 QCR9YGR183C 201 nt0.84□□□□□ -2.27
NIP1P32497 YCR018C-AYCR018C-A 255 nt0.83□□□□□ -2.28
NIP1P32497 RPL26BYGR034W 384 nt0.82□□□□□ -2.28
NIP1P32497 YHR063W-AYHR063W-A 336 nt0.82□□□□□ -2.28
NIP1P32497 NPR2YEL062W 1848 nt0.8□□□□□ -2.28
NIP1P32497 YDL073WYDL073W 2955 nt0.8□□□□□ -2.28
NIP1P32497 YIL142C-AYIL142C-A 333 nt0.8□□□□□ -2.28
NIP1P32497 YLL019W-AYLL019W-A 93 nt0.79□□□□□ -2.28
NIP1P32497 YJL197C-AYJL197C-A 282 nt0.78□□□□□ -2.28
NIP1P32497 YNL146WYNL146W 303 nt0.78□□□□□ -2.28
NIP1P32497 YOR015WYOR015W 360 nt0.78□□□□□ -2.28
NIP1P32497 YOR072W-BYOR072W-B 162 nt0.78□□□□□ -2.28
NIP1P32497 PMP1YCR024C-A 123 nt0.77□□□□□ -2.29
NIP1P32497 UTP20YBL004W 7482 nt0.77□□□□□ -2.29
NIP1P32497 PRP16YKR086W 3216 nt0.76□□□□□ -2.29
NIP1P32497 YDL185C-AYDL185C-A 228 nt0.76□□□□□ -2.29
NIP1P32497 YPR010C-AYPR010C-A 219 nt0.76□□□□□ -2.29
NIP1P32497 YPR092WYPR092W 306 nt0.76□□□□□ -2.29
NIP1P32497 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
NIP1P32497 YML002WYML002W 2214 nt0.75□□□□□ -2.29
NIP1P32497 YGL052WYGL052W 306 nt0.75□□□□□ -2.29
NIP1P32497 YAL067W-AYAL067W-A 228 nt0.75□□□□□ -2.29
NIP1P32497 snR65snR65 100 nt0.74□□□□□ -2.29
NIP1P32497 YLR120W-AYLR120W-A 102 nt0.74□□□□□ -2.29
NIP1P32497 YNL277W-AYNL277W-A 189 nt0.74□□□□□ -2.29
NIP1P32497 YOR008C-AYOR008C-A 225 nt0.74□□□□□ -2.29
NIP1P32497 snR190snR190 190 nt0.74□□□□□ -2.29
NIP1P32497 YMR160WYMR160W 2451 nt0.74□□□□□ -2.29
NIP1P32497 COY1YKL179C 2040 nt0.73□□□□□ -2.29
NIP1P32497 YOL014WYOL014W 375 nt0.73□□□□□ -2.29
NIP1P32497 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
NIP1P32497 CHS6YJL099W 2241 nt0.72□□□□□ -2.29
NIP1P32497 COX5BYIL111W 456 nt0.71□□□□□ -2.3
NIP1P32497 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
NIP1P32497 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
NIP1P32497 snR74snR74 88 nt0.7□□□□□ -2.3
NIP1P32497 YJL026C-AYJL026C-A 222 nt0.7□□□□□ -2.3
NIP1P32497 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
NIP1P32497 YMR307C-AYMR307C-A 195 nt0.7□□□□□ -2.3
NIP1P32497 SEC8YPR055W 3198 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
NIP1P32497 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
NIP1P32497 YEL020C-BYEL020C-B 198 nt0.68□□□□□ -2.3
NIP1P32497 YLR282CYLR282C 342 nt0.68□□□□□ -2.3
NIP1P32497 YMR172C-AYMR172C-A 384 nt0.68□□□□□ -2.3
NIP1P32497 YOR161W-AYOR161W-A 81 nt0.68□□□□□ -2.3
NIP1P32497 ASE1YOR058C 2658 nt0.67□□□□□ -2.3
NIP1P32497 YGL123C-AYGL123C-A 231 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 51.1 ms