Protein–RNA interactions for Protein: P0CX14

YRF1-3, Y' element ATP-dependent helicase protein 1 copy 3, yeastyeast

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3P0CX14 YCR001WYCR001W 315 nt-0.35□□□□□ -2.47
YRF1-3P0CX14 SDH7YDR511W 402 nt-0.36□□□□□ -2.47
YRF1-3P0CX14 YLL006W-AYLL006W-A 177 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YHL009W-BYHL009W-B 5409 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YDL185C-AYDL185C-A 228 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YJR087WYJR087W 351 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YLR334CYLR334C 381 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YNL058CYNL058C 951 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YBL071CYBL071C 309 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 IPP1YBR011C 864 nt-0.37□□□□□ -2.47
YRF1-3P0CX14 YIL029CYIL029C 429 nt-0.38□□□□□ -2.47
YRF1-3P0CX14 YNL319WYNL319W 441 nt-0.38□□□□□ -2.47
YRF1-3P0CX14 COY1YKL179C 2040 nt-0.38□□□□□ -2.47
YRF1-3P0CX14 BER1YLR412W 825 nt-0.39□□□□□ -2.47
YRF1-3P0CX14 YCR018C-AYCR018C-A 255 nt-0.39□□□□□ -2.47
YRF1-3P0CX14 YAL066WYAL066W 309 nt-0.39□□□□□ -2.47
YRF1-3P0CX14 HMLALPHA2YCL067C 633 nt-0.4□□□□□ -2.47
YRF1-3P0CX14 YCR022CYCR022C 345 nt-0.4□□□□□ -2.47
YRF1-3P0CX14 MATALPHA2YCR039C 633 nt-0.4□□□□□ -2.47
YRF1-3P0CX14 HMRA2YCR096C 360 nt-0.4□□□□□ -2.47
YRF1-3P0CX14 TAR1YLR154W-C 375 nt-0.4□□□□□ -2.47
YRF1-3P0CX14 ECL1YGR146C 636 nt-0.41□□□□□ -2.47
YRF1-3P0CX14 YLR287CYLR287C 1068 nt-0.41□□□□□ -2.47
YRF1-3P0CX14 RPS25BYLR333C 327 nt-0.41□□□□□ -2.48
YRF1-3P0CX14 DIE2YGR227W 1578 nt-0.42□□□□□ -2.48
YRF1-3P0CX14 RAD61YDR014W 1944 nt-0.42□□□□□ -2.48
YRF1-3P0CX14 YOR345CYOR345C 351 nt-0.44□□□□□ -2.48
YRF1-3P0CX14 YCR100CYCR100C 951 nt-0.44□□□□□ -2.48
YRF1-3P0CX14 YDR210WYDR210W 228 nt-0.44□□□□□ -2.48
YRF1-3P0CX14 YOL038C-AYOL038C-A 96 nt-0.44□□□□□ -2.48
YRF1-3P0CX14 YIR030W-AYIR030W-A 384 nt-0.45□□□□□ -2.48
YRF1-3P0CX14 SEC10YLR166C 2616 nt-0.45□□□□□ -2.48
YRF1-3P0CX14 YPL068CYPL068C 882 nt-0.46□□□□□ -2.48
YRF1-3P0CX14 YDR426CYDR426C 378 nt-0.46□□□□□ -2.48
YRF1-3P0CX14 tN(GUU)QtN(GUU)Q 71 nt-0.46□□□□□ -2.48
YRF1-3P0CX14 SGF11YPL047W 300 nt-0.46□□□□□ -2.48
YRF1-3P0CX14 YHR131W-AYHR131W-A 246 nt-0.47□□□□□ -2.48
YRF1-3P0CX14 ZEO1YOL109W 342 nt-0.47□□□□□ -2.48
YRF1-3P0CX14 YPR002C-AYPR002C-A 198 nt-0.48□□□□□ -2.49
YRF1-3P0CX14 RPF1YHR088W 888 nt-0.49□□□□□ -2.49
YRF1-3P0CX14 YPL229WYPL229W 621 nt-0.5□□□□□ -2.49
YRF1-3P0CX14 YJL120WYJL120W 324 nt-0.5□□□□□ -2.49
YRF1-3P0CX14 YHR007C-AYHR007C-A 216 nt-0.51□□□□□ -2.49
YRF1-3P0CX14 tT(UGU)G1tT(UGU)G1 72 nt-0.52□□□□□ -2.49
YRF1-3P0CX14 tT(UGU)G2tT(UGU)G2 72 nt-0.52□□□□□ -2.49
YRF1-3P0CX14 tT(UGU)PtT(UGU)P 72 nt-0.52□□□□□ -2.49
YRF1-3P0CX14 YML007C-AYML007C-A 111 nt-0.52□□□□□ -2.49
YRF1-3P0CX14 GRX5YPL059W 453 nt-0.52□□□□□ -2.49
YRF1-3P0CX14 PCF11YDR228C 1881 nt-0.52□□□□□ -2.49
YRF1-3P0CX14 FYV7YLR068W 456 nt-0.53□□□□□ -2.49
YRF1-3P0CX14 YDL016CYDL016C 303 nt-0.54□□□□□ -2.5
YRF1-3P0CX14 YNL303WYNL303W 348 nt-0.54□□□□□ -2.5
YRF1-3P0CX14 YPL205CYPL205C 345 nt-0.56□□□□□ -2.5
YRF1-3P0CX14 YPR092WYPR092W 306 nt-0.56□□□□□ -2.5
YRF1-3P0CX14 YBR099CYBR099C 384 nt-0.56□□□□□ -2.5
YRF1-3P0CX14 snR33snR33 183 nt-0.56□□□□□ -2.5
YRF1-3P0CX14 YBR223W-AYBR223W-A 120 nt-0.56□□□□□ -2.5
YRF1-3P0CX14 YHR138CYHR138C 345 nt-0.57□□□□□ -2.5
YRF1-3P0CX14 YLR282CYLR282C 342 nt-0.57□□□□□ -2.5
YRF1-3P0CX14 YOR192C-CYOR192C-C 237 nt-0.57□□□□□ -2.5
YRF1-3P0CX14 YKL083WYKL083W 615 nt-0.58□□□□□ -2.5
YRF1-3P0CX14 SNU13YEL026W 381 nt-0.58□□□□□ -2.5
YRF1-3P0CX14 MPC1YGL080W 393 nt-0.58□□□□□ -2.5
YRF1-3P0CX14 YLR041WYLR041W 321 nt-0.58□□□□□ -2.5
YRF1-3P0CX14 YLR456WYLR456W 615 nt-0.58□□□□□ -2.5
YRF1-3P0CX14 YCR038W-AYCR038W-A 126 nt-0.6□□□□□ -2.51
YRF1-3P0CX14 YAR047CYAR047C 321 nt-0.61□□□□□ -2.51
YRF1-3P0CX14 YMR158W-BYMR158W-B 321 nt-0.61□□□□□ -2.51
YRF1-3P0CX14 YNL067W-BYNL067W-B 141 nt-0.61□□□□□ -2.51
YRF1-3P0CX14 snR54snR54 86 nt-0.63□□□□□ -2.51
YRF1-3P0CX14 YBR072C-AYBR072C-A 162 nt-0.63□□□□□ -2.51
YRF1-3P0CX14 YGL123C-AYGL123C-A 231 nt-0.64□□□□□ -2.51
YRF1-3P0CX14 GPI15YNL038W 690 nt-0.65□□□□□ -2.51
YRF1-3P0CX14 YDR354C-AYDR354C-A 144 nt-0.65□□□□□ -2.51
YRF1-3P0CX14 AIM29YKR074W 468 nt-0.66□□□□□ -2.52
YRF1-3P0CX14 EST1YLR233C 2100 nt-0.67□□□□□ -2.52
YRF1-3P0CX14 YDR366CYDR366C 399 nt-0.67□□□□□ -2.52
YRF1-3P0CX14 YGR174W-AYGR174W-A 87 nt-0.67□□□□□ -2.52
YRF1-3P0CX14 YHR125WYHR125W 306 nt-0.67□□□□□ -2.52
YRF1-3P0CX14 YAR029WYAR029W 225 nt-0.67□□□□□ -2.52
YRF1-3P0CX14 YIL071W-AYIL071W-A 477 nt-0.68□□□□□ -2.52
YRF1-3P0CX14 YLR269CYLR269C 351 nt-0.68□□□□□ -2.52
YRF1-3P0CX14 YLR285C-AYLR285C-A 171 nt-0.68□□□□□ -2.52
YRF1-3P0CX14 YER084W-AYER084W-A 513 nt-0.69□□□□□ -2.52
YRF1-3P0CX14 AGA2YGL032C 264 nt-0.69□□□□□ -2.52
YRF1-3P0CX14 BLI1YKL061W 342 nt-0.69□□□□□ -2.52
YRF1-3P0CX14 tA(UGC)QtA(UGC)Q 76 nt-0.7□□□□□ -2.52
YRF1-3P0CX14 YFL012WYFL012W 447 nt-0.7□□□□□ -2.52
YRF1-3P0CX14 COG6YNL041C 2520 nt-0.7□□□□□ -2.52
YRF1-3P0CX14 YER006C-AYER006C-A 318 nt-0.71□□□□□ -2.52
YRF1-3P0CX14 CBS1YDL069C 690 nt-0.73□□□□□ -2.53
YRF1-3P0CX14 YKL100W-AYKL100W-A 90 nt-0.73□□□□□ -2.53
YRF1-3P0CX14 EAF6YJR082C 342 nt-0.74□□□□□ -2.53
YRF1-3P0CX14 SDH6YDR379C-A 240 nt-0.75□□□□□ -2.53
YRF1-3P0CX14 YFR009W-AYFR009W-A 258 nt-0.75□□□□□ -2.53
YRF1-3P0CX14 YHR130CYHR130C 336 nt-0.75□□□□□ -2.53
YRF1-3P0CX14 Q0255Q0255 1419 nt-0.75□□□□□ -2.53
YRF1-3P0CX14 PCC1YKR095W-A 267 nt-0.75□□□□□ -2.53
YRF1-3P0CX14 RPS27BYHR021C 249 nt-0.76□□□□□ -2.53
YRF1-3P0CX14 YEL020C-BYEL020C-B 198 nt-0.78□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms