Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 tT(AGU)O1tT(AGU)O1 73 nt0.52□□□□□ -2.33
SDO1Q07953 tT(AGU)O2tT(AGU)O2 73 nt0.52□□□□□ -2.33
SDO1Q07953 YKL083WYKL083W 615 nt0.52□□□□□ -2.33
SDO1Q07953 NOP9YJL010C 2001 nt0.52□□□□□ -2.33
SDO1Q07953 YDL158CYDL158C 309 nt0.51□□□□□ -2.33
SDO1Q07953 NPR2YEL062W 1848 nt0.51□□□□□ -2.33
SDO1Q07953 STF2YGR008C 255 nt0.51□□□□□ -2.33
SDO1Q07953 YGR290WYGR290W 444 nt0.51□□□□□ -2.33
SDO1Q07953 YPL044CYPL044C 549 nt0.51□□□□□ -2.33
SDO1Q07953 YHL041WYHL041W 450 nt0.5□□□□□ -2.33
SDO1Q07953 RPL26AYLR344W 384 nt0.5□□□□□ -2.33
SDO1Q07953 YBL008W-AYBL008W-A 240 nt0.5□□□□□ -2.33
SDO1Q07953 CHS6YJL099W 2241 nt0.49□□□□□ -2.33
SDO1Q07953 PTP2YOR208W 2253 nt0.49□□□□□ -2.33
SDO1Q07953 CBS1YDL069C 690 nt0.48□□□□□ -2.33
SDO1Q07953 YAR047CYAR047C 321 nt0.48□□□□□ -2.33
SDO1Q07953 YCK3YER123W 1575 nt0.48□□□□□ -2.33
SDO1Q07953 YER006C-AYER006C-A 318 nt0.47□□□□□ -2.33
SDO1Q07953 MAM33YIL070C 801 nt0.47□□□□□ -2.33
SDO1Q07953 YIL142C-AYIL142C-A 333 nt0.47□□□□□ -2.33
SDO1Q07953 FYV7YLR068W 456 nt0.47□□□□□ -2.33
SDO1Q07953 YOL013W-BYOL013W-B 291 nt0.47□□□□□ -2.33
SDO1Q07953 YOR218CYOR218C 420 nt0.47□□□□□ -2.33
SDO1Q07953 YMR160WYMR160W 2451 nt0.46□□□□□ -2.34
SDO1Q07953 LTE1YAL024C 4308 nt0.46□□□□□ -2.34
SDO1Q07953 YGR174W-AYGR174W-A 87 nt0.46□□□□□ -2.34
SDO1Q07953 RPS20YHL015W 366 nt0.46□□□□□ -2.34
SDO1Q07953 UBC7YMR022W 498 nt0.46□□□□□ -2.34
SDO1Q07953 YPL185WYPL185W 396 nt0.46□□□□□ -2.34
SDO1Q07953 YBR064WYBR064W 429 nt0.46□□□□□ -2.34
SDO1Q07953 UTP20YBL004W 7482 nt0.45□□□□□ -2.34
SDO1Q07953 ATG31YDR022C 591 nt0.45□□□□□ -2.34
SDO1Q07953 YAP6YDR259C 1152 nt0.45□□□□□ -2.34
SDO1Q07953 OLI1Q0130 231 nt0.45□□□□□ -2.34
SDO1Q07953 YLR101CYLR101C 396 nt0.45□□□□□ -2.34
SDO1Q07953 HUG1YML058W-A 207 nt0.45□□□□□ -2.34
SDO1Q07953 YOR072W-AYOR072W-A 249 nt0.45□□□□□ -2.34
SDO1Q07953 PCF11YDR228C 1881 nt0.45□□□□□ -2.34
SDO1Q07953 OST1YJL002C 1431 nt0.45□□□□□ -2.34
SDO1Q07953 BSC3YLR465C 309 nt0.44□□□□□ -2.34
SDO1Q07953 YJR011CYJR011C 786 nt0.43□□□□□ -2.34
SDO1Q07953 snR41snR41 95 nt0.43□□□□□ -2.34
SDO1Q07953 MCM10YIL150C 1716 nt0.42□□□□□ -2.34
SDO1Q07953 YIL134C-AYIL134C-A 204 nt0.42□□□□□ -2.34
SDO1Q07953 NIP100YPL174C 2607 nt0.41□□□□□ -2.34
SDO1Q07953 YEL030C-AYEL030C-A 315 nt0.41□□□□□ -2.34
SDO1Q07953 RPL26BYGR034W 384 nt0.41□□□□□ -2.34
SDO1Q07953 ISF1YMR081C 1017 nt0.41□□□□□ -2.34
SDO1Q07953 YBR206WYBR206W 324 nt0.41□□□□□ -2.34
SDO1Q07953 PAA1YDR071C 576 nt0.4□□□□□ -2.35
SDO1Q07953 RPS24BYIL069C 408 nt0.4□□□□□ -2.35
SDO1Q07953 YML007C-AYML007C-A 111 nt0.4□□□□□ -2.35
SDO1Q07953 TOM22YNL131W 459 nt0.4□□□□□ -2.35
SDO1Q07953 RPS30BYOR182C 192 nt0.4□□□□□ -2.35
SDO1Q07953 SPO21YOL091W 1830 nt0.4□□□□□ -2.35
SDO1Q07953 YSP1YHR155W 3687 nt0.4□□□□□ -2.35
SDO1Q07953 INA22YIR024C 651 nt0.39□□□□□ -2.35
SDO1Q07953 MRPL50YNR022C 420 nt0.39□□□□□ -2.35
SDO1Q07953 YPR002C-AYPR002C-A 198 nt0.39□□□□□ -2.35
SDO1Q07953 YAL016C-BYAL016C-B 186 nt0.38□□□□□ -2.35
SDO1Q07953 snR189snR189 189 nt0.38□□□□□ -2.35
SDO1Q07953 YJL127W-AYJL127W-A 117 nt0.36□□□□□ -2.35
SDO1Q07953 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
SDO1Q07953 FYV10YIL097W 1551 nt0.36□□□□□ -2.35
SDO1Q07953 PET111YMR257C 2403 nt0.34□□□□□ -2.35
SDO1Q07953 tF(GAA)BtF(GAA)B 73 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)FtF(GAA)F 73 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)GtF(GAA)G 73 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)H1tF(GAA)H1 73 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)H2tF(GAA)H2 73 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)MtF(GAA)M 73 nt0.34□□□□□ -2.36
SDO1Q07953 YDR426CYDR426C 378 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)P1tF(GAA)P1 73 nt0.34□□□□□ -2.36
SDO1Q07953 tF(GAA)P2tF(GAA)P2 73 nt0.34□□□□□ -2.36
SDO1Q07953 SBH1YER087C-B 249 nt0.34□□□□□ -2.36
SDO1Q07953 YLR456WYLR456W 615 nt0.34□□□□□ -2.36
SDO1Q07953 ABF2YMR072W 552 nt0.33□□□□□ -2.36
SDO1Q07953 YKL145W-AYKL145W-A 93 nt0.31□□□□□ -2.36
SDO1Q07953 PCC1YKR095W-A 267 nt0.31□□□□□ -2.36
SDO1Q07953 MLP1YKR095W 5628 nt0.31□□□□□ -2.36
SDO1Q07953 SEC8YPR055W 3198 nt0.3□□□□□ -2.36
SDO1Q07953 HMRA2YCR096C 360 nt0.3□□□□□ -2.36
SDO1Q07953 YFR012W-AYFR012W-A 87 nt0.3□□□□□ -2.36
SDO1Q07953 YOR053WYOR053W 342 nt0.3□□□□□ -2.36
SDO1Q07953 VIK1YPL253C 1944 nt0.3□□□□□ -2.36
SDO1Q07953 ASE1YOR058C 2658 nt0.3□□□□□ -2.36
SDO1Q07953 BEM3YPL115C 3387 nt0.29□□□□□ -2.36
SDO1Q07953 YNL211CYNL211C 261 nt0.29□□□□□ -2.36
SDO1Q07953 ATP19YOL077W-A 207 nt0.29□□□□□ -2.36
SDO1Q07953 YPR160W-AYPR160W-A 81 nt0.29□□□□□ -2.36
SDO1Q07953 AI1Q0050 2505 nt0.28□□□□□ -2.36
SDO1Q07953 ULP2YIL031W 3105 nt0.28□□□□□ -2.36
SDO1Q07953 PAU12YGR294W 363 nt0.28□□□□□ -2.36
SDO1Q07953 COX5BYIL111W 456 nt0.28□□□□□ -2.36
SDO1Q07953 YNL303WYNL303W 348 nt0.28□□□□□ -2.36
SDO1Q07953 YOR011W-AYOR011W-A 207 nt0.28□□□□□ -2.36
SDO1Q07953 YLR399W-AYLR399W-A 105 nt0.27□□□□□ -2.37
SDO1Q07953 YHL046W-AYHL046W-A 327 nt0.26□□□□□ -2.37
SDO1Q07953 YPL068CYPL068C 882 nt0.25□□□□□ -2.37
SDO1Q07953 PRP5YBR237W 2550 nt0.24□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 84.7 ms