Protein–RNA interactions for Protein: P40890

VTH2, VPS10 homolog 2, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH2P40890 YER076W-AYER076W-A 348 nt-0.95□□□□□ -2.56
VTH2P40890 YER158W-AYER158W-A 216 nt-0.95□□□□□ -2.56
VTH2P40890 YJL086CYJL086C 369 nt-0.95□□□□□ -2.56
VTH2P40890 YLL006W-AYLL006W-A 177 nt-0.95□□□□□ -2.56
VTH2P40890 YLR198CYLR198C 360 nt-0.95□□□□□ -2.56
VTH2P40890 RSM23YGL129C 1353 nt-0.95□□□□□ -2.56
VTH2P40890 PSF2YJL072C 642 nt-0.96□□□□□ -2.56
VTH2P40890 YLR287CYLR287C 1068 nt-0.96□□□□□ -2.56
VTH2P40890 tN(GUU)QtN(GUU)Q 71 nt-0.97□□□□□ -2.56
VTH2P40890 YJL135WYJL135W 318 nt-0.97□□□□□ -2.56
VTH2P40890 SDS22YKL193C 1017 nt-0.97□□□□□ -2.56
VTH2P40890 YMR290W-AYMR290W-A 348 nt-0.97□□□□□ -2.56
VTH2P40890 PET20YPL159C 762 nt-0.97□□□□□ -2.56
VTH2P40890 UBS1YBR165W 834 nt-0.97□□□□□ -2.56
VTH2P40890 IRC2YDR112W 309 nt-0.98□□□□□ -2.57
VTH2P40890 RSM18YER050C 417 nt-0.98□□□□□ -2.57
VTH2P40890 ECL1YGR146C 636 nt-0.98□□□□□ -2.57
VTH2P40890 BLS1YLR408C 369 nt-0.99□□□□□ -2.57
VTH2P40890 YBL008W-AYBL008W-A 240 nt-0.99□□□□□ -2.57
VTH2P40890 snR36snR36 182 nt-0.99□□□□□ -2.57
VTH2P40890 YCR024C-BYCR024C-B 267 nt-0.99□□□□□ -2.57
VTH2P40890 QCR7YDR529C 384 nt-0.99□□□□□ -2.57
VTH2P40890 YHL046W-AYHL046W-A 327 nt-0.99□□□□□ -2.57
VTH2P40890 GRX5YPL059W 453 nt-0.99□□□□□ -2.57
VTH2P40890 YER138W-AYER138W-A 105 nt-1□□□□□ -2.57
VTH2P40890 RPS25BYLR333C 327 nt-1□□□□□ -2.57
VTH2P40890 YDR290WYDR290W 330 nt-1.01□□□□□ -2.57
VTH2P40890 LSM4YER112W 564 nt-1.01□□□□□ -2.57
VTH2P40890 PFS1YHR185C 714 nt-1.02□□□□□ -2.57
VTH2P40890 YIL071W-AYIL071W-A 477 nt-1.02□□□□□ -2.57
VTH2P40890 YOL160WYOL160W 342 nt-1.03□□□□□ -2.57
VTH2P40890 SPO21YOL091W 1830 nt-1.03□□□□□ -2.57
VTH2P40890 tA(UGC)QtA(UGC)Q 76 nt-1.04□□□□□ -2.58
VTH2P40890 THG1YGR024C 714 nt-1.04□□□□□ -2.58
VTH2P40890 YDL007C-AYDL007C-A 258 nt-1.05□□□□□ -2.58
VTH2P40890 YML007C-AYML007C-A 111 nt-1.05□□□□□ -2.58
VTH2P40890 snR161snR161 161 nt-1.05□□□□□ -2.58
VTH2P40890 YJR140W-AYJR140W-A 150 nt-1.05□□□□□ -2.58
VTH2P40890 PBI2YNL015W 228 nt-1.05□□□□□ -2.58
VTH2P40890 YKL068W-AYKL068W-A 237 nt-1.07□□□□□ -2.58
VTH2P40890 YHR138CYHR138C 345 nt-1.08□□□□□ -2.58
VTH2P40890 YLR171WYLR171W 390 nt-1.08□□□□□ -2.58
VTH2P40890 tT(UGU)Q1tT(UGU)Q1 76 nt-1.1□□□□□ -2.58
VTH2P40890 YML108WYML108W 318 nt-1.1□□□□□ -2.58
VTH2P40890 DFG10YIL049W 762 nt-1.1□□□□□ -2.59
VTH2P40890 YDR269CYDR269C 324 nt-1.11□□□□□ -2.59
VTH2P40890 COX7YMR256C 183 nt-1.11□□□□□ -2.59
VTH2P40890 YBR099CYBR099C 384 nt-1.11□□□□□ -2.59
VTH2P40890 PCF11YDR228C 1881 nt-1.11□□□□□ -2.59
VTH2P40890 ATG31YDR022C 591 nt-1.12□□□□□ -2.59
VTH2P40890 YMR158W-BYMR158W-B 321 nt-1.12□□□□□ -2.59
VTH2P40890 DCP1YOL149W 696 nt-1.12□□□□□ -2.59
VTH2P40890 VPS63YLR261C 327 nt-1.13□□□□□ -2.59
VTH2P40890 YMR307C-AYMR307C-A 195 nt-1.13□□□□□ -2.59
VTH2P40890 EST1YLR233C 2100 nt-1.13□□□□□ -2.59
VTH2P40890 GPX1YKL026C 504 nt-1.14□□□□□ -2.59
VTH2P40890 RPS10BYMR230W 318 nt-1.15□□□□□ -2.59
VTH2P40890 YER079WYER079W 633 nt-1.15□□□□□ -2.59
VTH2P40890 YHR054CYHR054C 1065 nt-1.15□□□□□ -2.59
VTH2P40890 RUF20RUF20 443 nt-1.15□□□□□ -2.59
VTH2P40890 YIR044CYIR044C 186 nt-1.16□□□□□ -2.6
VTH2P40890 YOR020W-AYOR020W-A 273 nt-1.16□□□□□ -2.6
VTH2P40890 YDL185C-AYDL185C-A 228 nt-1.17□□□□□ -2.6
VTH2P40890 YOL029CYOL029C 606 nt-1.17□□□□□ -2.6
VTH2P40890 YPL261CYPL261C 309 nt-1.17□□□□□ -2.6
VTH2P40890 YLR041WYLR041W 321 nt-1.18□□□□□ -2.6
VTH2P40890 YOL106WYOL106W 354 nt-1.18□□□□□ -2.6
VTH2P40890 snR59snR59 78 nt-1.19□□□□□ -2.6
VTH2P40890 YGR228WYGR228W 345 nt-1.2□□□□□ -2.6
VTH2P40890 RPF1YHR088W 888 nt-1.2□□□□□ -2.6
VTH2P40890 SDH7YDR511W 402 nt-1.2□□□□□ -2.6
VTH2P40890 YGL258W-AYGL258W-A 234 nt-1.21□□□□□ -2.6
VTH2P40890 YNL171CYNL171C 369 nt-1.22□□□□□ -2.6
VTH2P40890 SNU13YEL026W 381 nt-1.23□□□□□ -2.61
VTH2P40890 YCR018C-AYCR018C-A 255 nt-1.24□□□□□ -2.61
VTH2P40890 CMC1YKL137W 336 nt-1.24□□□□□ -2.61
VTH2P40890 YMR254CYMR254C 309 nt-1.24□□□□□ -2.61
VTH2P40890 IRC16YPR038W 360 nt-1.24□□□□□ -2.61
VTH2P40890 CWC23YGL128C 852 nt-1.25□□□□□ -2.61
VTH2P40890 RPS20YHL015W 366 nt-1.25□□□□□ -2.61
VTH2P40890 YHL041WYHL041W 450 nt-1.25□□□□□ -2.61
VTH2P40890 LRP1YHR081W 555 nt-1.25□□□□□ -2.61
VTH2P40890 LIN1YHR156C 1023 nt-1.25□□□□□ -2.61
VTH2P40890 YKL111CYKL111C 336 nt-1.25□□□□□ -2.61
VTH2P40890 TAR1YLR154W-C 375 nt-1.25□□□□□ -2.61
VTH2P40890 YER188C-AYER188C-A 300 nt-1.27□□□□□ -2.61
VTH2P40890 POL32YJR043C 1053 nt-1.27□□□□□ -2.61
VTH2P40890 PAU9YBL108C-A 129 nt-1.27□□□□□ -2.61
VTH2P40890 BER1YLR412W 825 nt-1.28□□□□□ -2.61
VTH2P40890 YML100W-AYML100W-A 174 nt-1.28□□□□□ -2.61
VTH2P40890 snR72snR72 98 nt-1.3□□□□□ -2.62
VTH2P40890 BLI1YKL061W 342 nt-1.3□□□□□ -2.62
VTH2P40890 YOR011W-AYOR011W-A 207 nt-1.3□□□□□ -2.62
VTH2P40890 YPR092WYPR092W 306 nt-1.3□□□□□ -2.62
VTH2P40890 snR5snR5 204 nt-1.3□□□□□ -2.62
VTH2P40890 LOC1YFR001W 615 nt-1.3□□□□□ -2.62
VTH2P40890 YMR304C-AYMR304C-A 351 nt-1.3□□□□□ -2.62
VTH2P40890 AI5_BETAQ0075 1065 nt-1.31□□□□□ -2.62
VTH2P40890 POP6YGR030C 477 nt-1.31□□□□□ -2.62
VTH2P40890 YKL202WYKL202W 582 nt-1.32□□□□□ -2.62
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms