Protein–RNA interactions for Protein: P38751

SHU1, Suppressor of HU sensitivity involved in recombination protein 1, yeastyeast

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHU1P38751 HAL9YOL089C 3093 nt-0.39□□□□□ -2.47
SHU1P38751 YAP6YDR259C 1152 nt-0.39□□□□□ -2.47
SHU1P38751 YKL068W-AYKL068W-A 237 nt-0.39□□□□□ -2.47
SHU1P38751 YKU70YMR284W 1809 nt-0.4□□□□□ -2.47
SHU1P38751 YGL015CYGL015C 393 nt-0.4□□□□□ -2.47
SHU1P38751 YPR096CYPR096C 303 nt-0.4□□□□□ -2.47
SHU1P38751 NNF2YGR089W 2811 nt-0.41□□□□□ -2.47
SHU1P38751 PAA1YDR071C 576 nt-0.41□□□□□ -2.48
SHU1P38751 YOL160WYOL160W 342 nt-0.41□□□□□ -2.48
SHU1P38751 YOR248WYOR248W 303 nt-0.41□□□□□ -2.48
SHU1P38751 RAD34YDR314C 2079 nt-0.41□□□□□ -2.48
SHU1P38751 ECM9YKR004C 1134 nt-0.42□□□□□ -2.48
SHU1P38751 YLR399W-AYLR399W-A 105 nt-0.42□□□□□ -2.48
SHU1P38751 snR128snR128 126 nt-0.42□□□□□ -2.48
SHU1P38751 SNU56YDR240C 1479 nt-0.42□□□□□ -2.48
SHU1P38751 PRP39YML046W 1890 nt-0.43□□□□□ -2.48
SHU1P38751 SBH2YER019C-A 267 nt-0.43□□□□□ -2.48
SHU1P38751 YKL023C-AYKL023C-A 228 nt-0.43□□□□□ -2.48
SHU1P38751 NIP1YMR309C 2439 nt-0.44□□□□□ -2.48
SHU1P38751 YBR206WYBR206W 324 nt-0.44□□□□□ -2.48
SHU1P38751 SPO21YOL091W 1830 nt-0.44□□□□□ -2.48
SHU1P38751 BUL2YML111W 2763 nt-0.45□□□□□ -2.48
SHU1P38751 YEL073CYEL073C 324 nt-0.45□□□□□ -2.48
SHU1P38751 EMC4YGL231C 573 nt-0.45□□□□□ -2.48
SHU1P38751 YGR164WYGR164W 336 nt-0.45□□□□□ -2.48
SHU1P38751 snR72snR72 98 nt-0.46□□□□□ -2.48
SHU1P38751 PBI2YNL015W 228 nt-0.46□□□□□ -2.48
SHU1P38751 YPL261CYPL261C 309 nt-0.46□□□□□ -2.48
SHU1P38751 BUD26YDR241W 288 nt-0.47□□□□□ -2.48
SHU1P38751 YJR011CYJR011C 786 nt-0.47□□□□□ -2.48
SHU1P38751 ILM1YJR118C 612 nt-0.47□□□□□ -2.48
SHU1P38751 YLR217WYLR217W 324 nt-0.47□□□□□ -2.48
SHU1P38751 YML108WYML108W 318 nt-0.47□□□□□ -2.48
SHU1P38751 YGL239CYGL239C 315 nt-0.48□□□□□ -2.49
SHU1P38751 CUP1-1YHR053C 186 nt-0.48□□□□□ -2.49
SHU1P38751 CUP1-2YHR055C 186 nt-0.48□□□□□ -2.49
SHU1P38751 YIR044CYIR044C 186 nt-0.48□□□□□ -2.49
SHU1P38751 DCP1YOL149W 696 nt-0.48□□□□□ -2.49
SHU1P38751 snR5snR5 204 nt-0.49□□□□□ -2.49
SHU1P38751 tN(GUU)QtN(GUU)Q 71 nt-0.49□□□□□ -2.49
SHU1P38751 YHL046W-AYHL046W-A 327 nt-0.49□□□□□ -2.49
SHU1P38751 YLR101CYLR101C 396 nt-0.49□□□□□ -2.49
SHU1P38751 YGR228WYGR228W 345 nt-0.5□□□□□ -2.49
SHU1P38751 YLR171WYLR171W 390 nt-0.5□□□□□ -2.49
SHU1P38751 ISF1YMR081C 1017 nt-0.5□□□□□ -2.49
SHU1P38751 RAD61YDR014W 1944 nt-0.51□□□□□ -2.49
SHU1P38751 CMC1YKL137W 336 nt-0.51□□□□□ -2.49
SHU1P38751 YPR039WYPR039W 336 nt-0.51□□□□□ -2.49
SHU1P38751 MRPL32YCR003W 552 nt-0.52□□□□□ -2.49
SHU1P38751 YJR141WYJR141W 1044 nt-0.52□□□□□ -2.49
SHU1P38751 YER135CYER135C 393 nt-0.53□□□□□ -2.49
SHU1P38751 APQ13YJL075C 417 nt-0.53□□□□□ -2.49
SHU1P38751 snR46snR46 197 nt-0.53□□□□□ -2.49
SHU1P38751 YHR131W-AYHR131W-A 246 nt-0.54□□□□□ -2.5
SHU1P38751 YKL202WYKL202W 582 nt-0.54□□□□□ -2.5
SHU1P38751 HTB2YBL002W 396 nt-0.54□□□□□ -2.5
SHU1P38751 YBR063CYBR063C 1215 nt-0.54□□□□□ -2.5
SHU1P38751 UBS1YBR165W 834 nt-0.54□□□□□ -2.5
SHU1P38751 SEC10YLR166C 2616 nt-0.54□□□□□ -2.5
SHU1P38751 PTP2YOR208W 2253 nt-0.55□□□□□ -2.5
SHU1P38751 YJL007CYJL007C 315 nt-0.55□□□□□ -2.5
SHU1P38751 YBL062WYBL062W 381 nt-0.55□□□□□ -2.5
SHU1P38751 YOL029CYOL029C 606 nt-0.55□□□□□ -2.5
SHU1P38751 YDL185C-AYDL185C-A 228 nt-0.56□□□□□ -2.5
SHU1P38751 snR51snR51 107 nt-0.56□□□□□ -2.5
SHU1P38751 CSE1YGL238W 2883 nt-0.57□□□□□ -2.5
SHU1P38751 YBL107W-AYBL107W-A 105 nt-0.57□□□□□ -2.5
SHU1P38751 IPP1YBR011C 864 nt-0.57□□□□□ -2.5
SHU1P38751 YIL066W-AYIL066W-A 444 nt-0.58□□□□□ -2.5
SHU1P38751 YLL006W-AYLL006W-A 177 nt-0.58□□□□□ -2.5
SHU1P38751 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
SHU1P38751 HUR1YGL168W 333 nt-0.59□□□□□ -2.5
SHU1P38751 NIP100YPL174C 2607 nt-0.59□□□□□ -2.5
SHU1P38751 RPS20YHL015W 366 nt-0.6□□□□□ -2.51
SHU1P38751 YIR030W-AYIR030W-A 384 nt-0.6□□□□□ -2.51
SHU1P38751 SEM1YDR363W-A 270 nt-0.61□□□□□ -2.51
SHU1P38751 ECL1YGR146C 636 nt-0.61□□□□□ -2.51
SHU1P38751 YMR254CYMR254C 309 nt-0.61□□□□□ -2.51
SHU1P38751 YCR001WYCR001W 315 nt-0.62□□□□□ -2.51
SHU1P38751 YGR115CYGR115C 780 nt-0.62□□□□□ -2.51
SHU1P38751 SCEIQ0160 708 nt-0.62□□□□□ -2.51
SHU1P38751 YPL205CYPL205C 345 nt-0.62□□□□□ -2.51
SHU1P38751 snR9snR9 187 nt-0.63□□□□□ -2.51
SHU1P38751 SDH7YDR511W 402 nt-0.63□□□□□ -2.51
SHU1P38751 YMR307C-AYMR307C-A 195 nt-0.63□□□□□ -2.51
SHU1P38751 POP7YBR167C 423 nt-0.63□□□□□ -2.51
SHU1P38751 YCR018C-AYCR018C-A 255 nt-0.64□□□□□ -2.51
SHU1P38751 ATG31YDR022C 591 nt-0.64□□□□□ -2.51
SHU1P38751 TIM13YGR181W 318 nt-0.65□□□□□ -2.51
SHU1P38751 YNL319WYNL319W 441 nt-0.65□□□□□ -2.51
SHU1P38751 SGF11YPL047W 300 nt-0.65□□□□□ -2.51
SHU1P38751 YPL182CYPL182C 384 nt-0.65□□□□□ -2.51
SHU1P38751 DIE2YGR227W 1578 nt-0.66□□□□□ -2.51
SHU1P38751 YGR025WYGR025W 303 nt-0.66□□□□□ -2.52
SHU1P38751 YOR011W-AYOR011W-A 207 nt-0.66□□□□□ -2.52
SHU1P38751 RPF1YHR088W 888 nt-0.67□□□□□ -2.52
SHU1P38751 BER1YLR412W 825 nt-0.67□□□□□ -2.52
SHU1P38751 YPL225WYPL225W 441 nt-0.67□□□□□ -2.52
SHU1P38751 YGL230CYGL230C 444 nt-0.68□□□□□ -2.52
SHU1P38751 YPR092WYPR092W 306 nt-0.68□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms