Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 AFB1YLR040C 675 nt-0.05□□□□□ -2.42
RPL40AP0CH08 RPS27AYKL156W 249 nt-0.06□□□□□ -2.42
RPL40AP0CH08 IRC16YPR038W 360 nt-0.06□□□□□ -2.42
RPL40AP0CH08 OLI1Q0130 231 nt-0.07□□□□□ -2.42
RPL40AP0CH08 YGL239CYGL239C 315 nt-0.07□□□□□ -2.42
RPL40AP0CH08 SCEIQ0160 708 nt-0.07□□□□□ -2.42
RPL40AP0CH08 PRP5YBR237W 2550 nt-0.07□□□□□ -2.42
RPL40AP0CH08 YDR029WYDR029W 315 nt-0.08□□□□□ -2.42
RPL40AP0CH08 MND1YGL183C 660 nt-0.08□□□□□ -2.42
RPL40AP0CH08 YOR053WYOR053W 342 nt-0.08□□□□□ -2.42
RPL40AP0CH08 MCM10YIL150C 1716 nt-0.08□□□□□ -2.42
RPL40AP0CH08 MYO1YHR023W 5787 nt-0.08□□□□□ -2.42
RPL40AP0CH08 COX5BYIL111W 456 nt-0.09□□□□□ -2.42
RPL40AP0CH08 APQ13YJL075C 417 nt-0.09□□□□□ -2.42
RPL40AP0CH08 YOL160WYOL160W 342 nt-0.09□□□□□ -2.42
RPL40AP0CH08 YBR064WYBR064W 429 nt-0.09□□□□□ -2.42
RPL40AP0CH08 MRPL32YCR003W 552 nt-0.1□□□□□ -2.43
RPL40AP0CH08 PRP21YJL203W 843 nt-0.1□□□□□ -2.43
RPL40AP0CH08 ECM9YKR004C 1134 nt-0.1□□□□□ -2.43
RPL40AP0CH08 MRPS8YMR158W 468 nt-0.1□□□□□ -2.43
RPL40AP0CH08 MRPL50YNR022C 420 nt-0.1□□□□□ -2.43
RPL40AP0CH08 YPL060C-AYPL060C-A 3315 nt-0.1□□□□□ -2.43
RPL40AP0CH08 YIR018C-AYIR018C-A 138 nt-0.11□□□□□ -2.43
RPL40AP0CH08 YMR141W-AYMR141W-A 225 nt-0.11□□□□□ -2.43
RPL40AP0CH08 YPL185WYPL185W 396 nt-0.11□□□□□ -2.43
RPL40AP0CH08 YDL187CYDL187C 330 nt-0.12□□□□□ -2.43
RPL40AP0CH08 PAA1YDR071C 576 nt-0.12□□□□□ -2.43
RPL40AP0CH08 SSS1YDR086C 243 nt-0.12□□□□□ -2.43
RPL40AP0CH08 YLR198CYLR198C 360 nt-0.12□□□□□ -2.43
RPL40AP0CH08 PBI2YNL015W 228 nt-0.12□□□□□ -2.43
RPL40AP0CH08 snR190snR190 190 nt-0.12□□□□□ -2.43
RPL40AP0CH08 YAP6YDR259C 1152 nt-0.13□□□□□ -2.43
RPL40AP0CH08 YIR044CYIR044C 186 nt-0.13□□□□□ -2.43
RPL40AP0CH08 YBL008W-AYBL008W-A 240 nt-0.13□□□□□ -2.43
RPL40AP0CH08 ORC3YLL004W 1851 nt-0.14□□□□□ -2.43
RPL40AP0CH08 SPO21YOL091W 1830 nt-0.14□□□□□ -2.43
RPL40AP0CH08 snR72snR72 98 nt-0.14□□□□□ -2.43
RPL40AP0CH08 YKL202WYKL202W 582 nt-0.14□□□□□ -2.43
RPL40AP0CH08 YPL261CYPL261C 309 nt-0.14□□□□□ -2.43
RPL40AP0CH08 RPL35AYDL191W 363 nt-0.15□□□□□ -2.43
RPL40AP0CH08 OST4YDL232W 111 nt-0.15□□□□□ -2.43
RPL40AP0CH08 YOR186C-AYOR186C-A 210 nt-0.15□□□□□ -2.43
RPL40AP0CH08 RCO1YMR075W 2055 nt-0.16□□□□□ -2.44
RPL40AP0CH08 YDR371C-AYDR371C-A 105 nt-0.16□□□□□ -2.44
RPL40AP0CH08 YER175W-AYER175W-A 165 nt-0.16□□□□□ -2.44
RPL40AP0CH08 YIL066W-AYIL066W-A 444 nt-0.16□□□□□ -2.44
RPL40AP0CH08 SNU56YDR240C 1479 nt-0.16□□□□□ -2.44
RPL40AP0CH08 YJR087WYJR087W 351 nt-0.17□□□□□ -2.44
RPL40AP0CH08 YKL068W-AYKL068W-A 237 nt-0.17□□□□□ -2.44
RPL40AP0CH08 YOL029CYOL029C 606 nt-0.17□□□□□ -2.44
RPL40AP0CH08 LEE1YPL054W 906 nt-0.17□□□□□ -2.44
RPL40AP0CH08 YPL182CYPL182C 384 nt-0.17□□□□□ -2.44
RPL40AP0CH08 YPR160W-AYPR160W-A 81 nt-0.17□□□□□ -2.44
RPL40AP0CH08 YCR100CYCR100C 951 nt-0.18□□□□□ -2.44
RPL40AP0CH08 YER135CYER135C 393 nt-0.18□□□□□ -2.44
RPL40AP0CH08 YFR012W-AYFR012W-A 87 nt-0.18□□□□□ -2.44
RPL40AP0CH08 HUR1YGL168W 333 nt-0.18□□□□□ -2.44
RPL40AP0CH08 YIL029CYIL029C 429 nt-0.18□□□□□ -2.44
RPL40AP0CH08 YGR025WYGR025W 303 nt-0.19□□□□□ -2.44
RPL40AP0CH08 NFU1YKL040C 771 nt-0.19□□□□□ -2.44
RPL40AP0CH08 YLR399W-AYLR399W-A 105 nt-0.19□□□□□ -2.44
RPL40AP0CH08 PTP2YOR208W 2253 nt-0.2□□□□□ -2.44
RPL40AP0CH08 RPS26AYGL189C 360 nt-0.2□□□□□ -2.44
RPL40AP0CH08 MAM33YIL070C 801 nt-0.2□□□□□ -2.44
RPL40AP0CH08 YAL067W-AYAL067W-A 228 nt-0.2□□□□□ -2.44
RPL40AP0CH08 YBR206WYBR206W 324 nt-0.2□□□□□ -2.44
RPL40AP0CH08 snR51snR51 107 nt-0.2□□□□□ -2.44
RPL40AP0CH08 ASE1YOR058C 2658 nt-0.21□□□□□ -2.44
RPL40AP0CH08 TIM13YGR181W 318 nt-0.21□□□□□ -2.44
RPL40AP0CH08 YKL136WYKL136W 399 nt-0.21□□□□□ -2.44
RPL40AP0CH08 YML108WYML108W 318 nt-0.21□□□□□ -2.44
RPL40AP0CH08 YOL038C-AYOL038C-A 96 nt-0.21□□□□□ -2.44
RPL40AP0CH08 DCP1YOL149W 696 nt-0.21□□□□□ -2.44
RPL40AP0CH08 TSC3YBR058C-A 243 nt-0.21□□□□□ -2.44
RPL40AP0CH08 YCR001WYCR001W 315 nt-0.23□□□□□ -2.45
RPL40AP0CH08 YKL044WYKL044W 321 nt-0.23□□□□□ -2.45
RPL40AP0CH08 YAL066WYAL066W 309 nt-0.24□□□□□ -2.45
RPL40AP0CH08 YDL016CYDL016C 303 nt-0.25□□□□□ -2.45
RPL40AP0CH08 YDR210WYDR210W 228 nt-0.25□□□□□ -2.45
RPL40AP0CH08 SDH7YDR511W 402 nt-0.25□□□□□ -2.45
RPL40AP0CH08 YJR011CYJR011C 786 nt-0.25□□□□□ -2.45
RPL40AP0CH08 YNL146WYNL146W 303 nt-0.25□□□□□ -2.45
RPL40AP0CH08 YNL211CYNL211C 261 nt-0.25□□□□□ -2.45
RPL40AP0CH08 YLR171WYLR171W 390 nt-0.26□□□□□ -2.45
RPL40AP0CH08 YPR170W-AYPR170W-A 186 nt-0.26□□□□□ -2.45
RPL40AP0CH08 MPC1YGL080W 393 nt-0.27□□□□□ -2.45
RPL40AP0CH08 YHL046W-AYHL046W-A 327 nt-0.27□□□□□ -2.45
RPL40AP0CH08 YKL023C-AYKL023C-A 228 nt-0.27□□□□□ -2.45
RPL40AP0CH08 IPP1YBR011C 864 nt-0.27□□□□□ -2.45
RPL40AP0CH08 HMLALPHA2YCL067C 633 nt-0.28□□□□□ -2.45
RPL40AP0CH08 MATALPHA2YCR039C 633 nt-0.28□□□□□ -2.45
RPL40AP0CH08 YPL225WYPL225W 441 nt-0.28□□□□□ -2.45
RPL40AP0CH08 BER1YLR412W 825 nt-0.29□□□□□ -2.46
RPL40AP0CH08 YOR345CYOR345C 351 nt-0.29□□□□□ -2.46
RPL40AP0CH08 ATG31YDR022C 591 nt-0.3□□□□□ -2.46
RPL40AP0CH08 RPS20YHL015W 366 nt-0.3□□□□□ -2.46
RPL40AP0CH08 YNL058CYNL058C 951 nt-0.3□□□□□ -2.46
RPL40AP0CH08 NIP1YMR309C 2439 nt-0.3□□□□□ -2.46
RPL40AP0CH08 YKU70YMR284W 1809 nt-0.31□□□□□ -2.46
RPL40AP0CH08 snR8snR8 190 nt-0.31□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 45 ms