Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YDR269CYDR269C 324 nt-0.11□□□□□ -2.43
TY1B-HO13535 PRP5YBR237W 2550 nt-0.12□□□□□ -2.43
TY1B-HO13535 YGR228WYGR228W 345 nt-0.12□□□□□ -2.43
TY1B-HO13535 YNL211CYNL211C 261 nt-0.12□□□□□ -2.43
TY1B-HO13535 YER076W-AYER076W-A 348 nt-0.13□□□□□ -2.43
TY1B-HO13535 YIR018C-AYIR018C-A 138 nt-0.13□□□□□ -2.43
TY1B-HO13535 PBI2YNL015W 228 nt-0.13□□□□□ -2.43
TY1B-HO13535 IRC16YPR038W 360 nt-0.13□□□□□ -2.43
TY1B-HO13535 YDL187CYDL187C 330 nt-0.14□□□□□ -2.43
TY1B-HO13535 YDR344CYDR344C 444 nt-0.14□□□□□ -2.43
TY1B-HO13535 YFR057WYFR057W 456 nt-0.14□□□□□ -2.43
TY1B-HO13535 YGL230CYGL230C 444 nt-0.14□□□□□ -2.43
TY1B-HO13535 YJL007CYJL007C 315 nt-0.14□□□□□ -2.43
TY1B-HO13535 YLR232WYLR232W 348 nt-0.14□□□□□ -2.43
TY1B-HO13535 EFR3YMR212C 2349 nt-0.14□□□□□ -2.43
TY1B-HO13535 RAD34YDR314C 2079 nt-0.14□□□□□ -2.43
TY1B-HO13535 DCP1YOL149W 696 nt-0.14□□□□□ -2.43
TY1B-HO13535 snR9snR9 187 nt-0.15□□□□□ -2.43
TY1B-HO13535 MRPL32YCR003W 552 nt-0.16□□□□□ -2.43
TY1B-HO13535 HUR1YGL168W 333 nt-0.16□□□□□ -2.43
TY1B-HO13535 YGR164WYGR164W 336 nt-0.16□□□□□ -2.43
TY1B-HO13535 YKL202WYKL202W 582 nt-0.16□□□□□ -2.43
TY1B-HO13535 YMR141W-AYMR141W-A 225 nt-0.16□□□□□ -2.43
TY1B-HO13535 POP7YBR167C 423 nt-0.16□□□□□ -2.43
TY1B-HO13535 ASE1YOR058C 2658 nt-0.16□□□□□ -2.44
TY1B-HO13535 YER175W-AYER175W-A 165 nt-0.17□□□□□ -2.44
TY1B-HO13535 MAM33YIL070C 801 nt-0.17□□□□□ -2.44
TY1B-HO13535 SBH2YER019C-A 267 nt-0.17□□□□□ -2.44
TY1B-HO13535 YGL239CYGL239C 315 nt-0.17□□□□□ -2.44
TY1B-HO13535 TSC3YBR058C-A 243 nt-0.17□□□□□ -2.44
TY1B-HO13535 YBR206WYBR206W 324 nt-0.17□□□□□ -2.44
TY1B-HO13535 EMC4YGL231C 573 nt-0.18□□□□□ -2.44
TY1B-HO13535 ORC3YLL004W 1851 nt-0.19□□□□□ -2.44
TY1B-HO13535 NFU1YKL040C 771 nt-0.19□□□□□ -2.44
TY1B-HO13535 YAL067W-AYAL067W-A 228 nt-0.19□□□□□ -2.44
TY1B-HO13535 YAP6YDR259C 1152 nt-0.19□□□□□ -2.44
TY1B-HO13535 RPS27AYKL156W 249 nt-0.19□□□□□ -2.44
TY1B-HO13535 YIL066W-AYIL066W-A 444 nt-0.2□□□□□ -2.44
TY1B-HO13535 YPR039WYPR039W 336 nt-0.2□□□□□ -2.44
TY1B-HO13535 YPR160W-AYPR160W-A 81 nt-0.2□□□□□ -2.44
TY1B-HO13535 snR51snR51 107 nt-0.2□□□□□ -2.44
TY1B-HO13535 PAA1YDR071C 576 nt-0.21□□□□□ -2.44
TY1B-HO13535 TIM13YGR181W 318 nt-0.21□□□□□ -2.44
TY1B-HO13535 YLR399W-AYLR399W-A 105 nt-0.21□□□□□ -2.44
TY1B-HO13535 YDR371C-AYDR371C-A 105 nt-0.22□□□□□ -2.44
TY1B-HO13535 TFB5YDR079C-A 219 nt-0.22□□□□□ -2.45
TY1B-HO13535 CMC1YKL137W 336 nt-0.22□□□□□ -2.45
TY1B-HO13535 YPL261CYPL261C 309 nt-0.22□□□□□ -2.45
TY1B-HO13535 MCM10YIL150C 1716 nt-0.22□□□□□ -2.45
TY1B-HO13535 snR46snR46 197 nt-0.23□□□□□ -2.45
TY1B-HO13535 YHL009W-BYHL009W-B 5409 nt-0.23□□□□□ -2.45
TY1B-HO13535 NIP1YMR309C 2439 nt-0.23□□□□□ -2.45
TY1B-HO13535 YPL182CYPL182C 384 nt-0.24□□□□□ -2.45
TY1B-HO13535 YJR011CYJR011C 786 nt-0.25□□□□□ -2.45
TY1B-HO13535 ECM9YKR004C 1134 nt-0.25□□□□□ -2.45
TY1B-HO13535 YMR254CYMR254C 309 nt-0.25□□□□□ -2.45
TY1B-HO13535 YOL029CYOL029C 606 nt-0.25□□□□□ -2.45
TY1B-HO13535 YOR011W-AYOR011W-A 207 nt-0.25□□□□□ -2.45
TY1B-HO13535 OST4YDL232W 111 nt-0.26□□□□□ -2.45
TY1B-HO13535 RPS26AYGL189C 360 nt-0.26□□□□□ -2.45
TY1B-HO13535 SNU56YDR240C 1479 nt-0.26□□□□□ -2.45
TY1B-HO13535 YGR025WYGR025W 303 nt-0.27□□□□□ -2.45
TY1B-HO13535 YIR044CYIR044C 186 nt-0.27□□□□□ -2.45
TY1B-HO13535 YJL020W-AYJL020W-A 258 nt-0.27□□□□□ -2.45
TY1B-HO13535 YFR012W-AYFR012W-A 87 nt-0.27□□□□□ -2.45
TY1B-HO13535 YKL136WYKL136W 399 nt-0.27□□□□□ -2.45
TY1B-HO13535 PTP2YOR208W 2253 nt-0.27□□□□□ -2.45
TY1B-HO13535 YDL011CYDL011C 324 nt-0.28□□□□□ -2.45
TY1B-HO13535 snR8snR8 190 nt-0.28□□□□□ -2.45
TY1B-HO13535 RPS20YHL015W 366 nt-0.28□□□□□ -2.45
TY1B-HO13535 YLR171WYLR171W 390 nt-0.28□□□□□ -2.45
TY1B-HO13535 SPO21YOL091W 1830 nt-0.28□□□□□ -2.45
TY1B-HO13535 YHL041WYHL041W 450 nt-0.29□□□□□ -2.46
TY1B-HO13535 YHL046W-AYHL046W-A 327 nt-0.29□□□□□ -2.46
TY1B-HO13535 APQ13YJL075C 417 nt-0.29□□□□□ -2.46
TY1B-HO13535 SOV1YMR066W 2697 nt-0.3□□□□□ -2.46
TY1B-HO13535 YKU70YMR284W 1809 nt-0.3□□□□□ -2.46
TY1B-HO13535 ATG31YDR022C 591 nt-0.3□□□□□ -2.46
TY1B-HO13535 SCEIQ0160 708 nt-0.3□□□□□ -2.46
TY1B-HO13535 MRPS8YMR158W 468 nt-0.3□□□□□ -2.46
TY1B-HO13535 YER135CYER135C 393 nt-0.31□□□□□ -2.46
TY1B-HO13535 YLR101CYLR101C 396 nt-0.31□□□□□ -2.46
TY1B-HO13535 HTB2YBL002W 396 nt-0.31□□□□□ -2.46
TY1B-HO13535 YML108WYML108W 318 nt-0.31□□□□□ -2.46
TY1B-HO13535 snR128snR128 126 nt-0.31□□□□□ -2.46
TY1B-HO13535 YKL023C-AYKL023C-A 228 nt-0.32□□□□□ -2.46
TY1B-HO13535 YKL044WYKL044W 321 nt-0.32□□□□□ -2.46
TY1B-HO13535 YKL068W-AYKL068W-A 237 nt-0.32□□□□□ -2.46
TY1B-HO13535 YMR307C-AYMR307C-A 195 nt-0.32□□□□□ -2.46
TY1B-HO13535 MND1YGL183C 660 nt-0.32□□□□□ -2.46
TY1B-HO13535 YNL146WYNL146W 303 nt-0.32□□□□□ -2.46
TY1B-HO13535 snR72snR72 98 nt-0.33□□□□□ -2.46
TY1B-HO13535 SEM1YDR363W-A 270 nt-0.34□□□□□ -2.46
TY1B-HO13535 YEL073CYEL073C 324 nt-0.34□□□□□ -2.46
TY1B-HO13535 YLR198CYLR198C 360 nt-0.34□□□□□ -2.46
TY1B-HO13535 YNL058CYNL058C 951 nt-0.34□□□□□ -2.46
TY1B-HO13535 YIL029CYIL029C 429 nt-0.34□□□□□ -2.46
TY1B-HO13535 YLL006W-AYLL006W-A 177 nt-0.34□□□□□ -2.46
TY1B-HO13535 YPL225WYPL225W 441 nt-0.35□□□□□ -2.47
TY1B-HO13535 YCR001WYCR001W 315 nt-0.36□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms