Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgn5Q9JL35 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgn5Q9JL35 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgn5Q9JL35 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Gm9988-201ENSMUST00000069786 435 ntBASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn5Q9JL35 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Reep4-203ENSMUST00000226563 1444 ntBASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn5Q9JL35 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Gm12821-201ENSMUST00000120022 600 ntBASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Mir8112-201ENSMUST00000184382 131 ntBASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Hmgn5Q9JL35 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hmgn5Q9JL35 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgn5Q9JL35 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms