Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco4Q9JIS3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco4Q9JIS3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco4Q9JIS3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco4Q9JIS3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms