RNA–Protein interactions for RNA: ENSMUST00000064129.13

Ttc39a-201, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ttc39a, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-201ENSMUST00000064129 NischQ80TM9 1593 aa35.01■■■■□ 3.2
Ttc39a-201ENSMUST00000064129 Gm35339A0A140LHH9 1649 aa34.71■■■■□ 3.15
Ttc39a-201ENSMUST00000064129 Abcc9P70170 1546 aa34.03■■■■□ 3.04
Ttc39a-201ENSMUST00000064129 Abcc8B2RUS7 1588 aa33.4■■■□□ 2.94
Ttc39a-201ENSMUST00000064129 Rhox8Q6VSS7 320 aa31.85■■■□□ 2.69
Ttc39a-201ENSMUST00000064129 ScribQ80U72 1612 aa31.38■■■□□ 2.61
Ttc39a-201ENSMUST00000064129 Rtl1Q7M732 1744 aa31.13■■■□□ 2.57
Ttc39a-201ENSMUST00000064129 Dcaf1Q80TR8 1506 aa31.09■■■□□ 2.57
Ttc39a-201ENSMUST00000064129 Kdm5dQ62240 1548 aa30.69■■■□□ 2.5
Ttc39a-201ENSMUST00000064129 Rb1cc1Q9ESK9 1588 aa30.66■■■□□ 2.5
Ttc39a-201ENSMUST00000064129 NacadQ5SWP3 1504 aa30.48■■■□□ 2.47
Ttc39a-201ENSMUST00000064129 Ccdc180J3QNE4 1664 aa30.42■■■□□ 2.46
Ttc39a-201ENSMUST00000064129 Baz1aO88379 1555 aa30.3■■■□□ 2.44
Ttc39a-201ENSMUST00000064129 Zcchc6Q5BLK4 1491 aaKnown RBP30.19■■■□□ 2.42
Ttc39a-201ENSMUST00000064129 Sycp2Q9CUU3 1500 aa29.84■■■□□ 2.37
Ttc39a-201ENSMUST00000064129 Crybg2B7ZCC2 1516 aa29.81■■■□□ 2.36
Ttc39a-201ENSMUST00000064129 Smarca2Q6DIC0 1577 aa29.59■■■□□ 2.33
Ttc39a-201ENSMUST00000064129 Ccdc136Q3TVA9 1136 aa29.58■■■□□ 2.33
Ttc39a-201ENSMUST00000064129 BicraF8VPZ9 1578 aa29.24■■■□□ 2.27
Ttc39a-201ENSMUST00000064129 Trim41Q5NCC3 630 aa29.02■■■□□ 2.24
Ttc39a-201ENSMUST00000064129 HrcG5E8J6 738 aa28.99■■■□□ 2.23
Ttc39a-201ENSMUST00000064129 Cecr2E9Q2Z1 1453 aa28.95■■■□□ 2.22
Ttc39a-201ENSMUST00000064129 Brd4Q9ESU6 1400 aaKnown RBP28.81■■■□□ 2.2
Ttc39a-201ENSMUST00000064129 Synj1Q8CHC4 1574 aa28.64■■■□□ 2.18
Ttc39a-201ENSMUST00000064129 CftrP26361 1476 aa28.51■■■□□ 2.15
Ttc39a-201ENSMUST00000064129 Smarca4Q3TKT4 1613 aaKnown RBP28.47■■■□□ 2.15
Ttc39a-201ENSMUST00000064129 Cttnbp2B9EJA2 1648 aa28.4■■■□□ 2.14
Ttc39a-201ENSMUST00000064129 Cep164Q5DU05 1446 aa28.38■■■□□ 2.13
Ttc39a-201ENSMUST00000064129 Golga3P55937 1487 aa28.37■■■□□ 2.13
Ttc39a-201ENSMUST00000064129 Cngb1E1AZ71 1325 aa28.36■■■□□ 2.13
Ttc39a-201ENSMUST00000064129 Rsf1E9PWW9 1441 aaKnown RBP28.21■■■□□ 2.11
Ttc39a-201ENSMUST00000064129 Esf1Q3V1V3 845 aaKnown RBP28.15■■■□□ 2.1
Ttc39a-201ENSMUST00000064129 Top2bQ64511 1612 aa28.14■■■□□ 2.09
Ttc39a-201ENSMUST00000064129 Iqgap2Q3UQ44 1575 aa28.13■■■□□ 2.09
Ttc39a-201ENSMUST00000064129 Chic1Q8CBW7 227 aa28.1■■■□□ 2.09
Ttc39a-201ENSMUST00000064129 Ccdc88bQ4QRL3 1481 aa28.1■■■□□ 2.09
Ttc39a-201ENSMUST00000064129 Atad2bE9Q166 1460 aaKnown RBP28.08■■■□□ 2.08
Ttc39a-201ENSMUST00000064129 Pds5bQ4VA53 1446 aaKnown RBP28.01■■■□□ 2.07
Ttc39a-201ENSMUST00000064129 Cc2d2aQ8CFW7 1633 aa27.88■■■□□ 2.05
Ttc39a-201ENSMUST00000064129 Ehmt2Q9Z148 1263 aaKnown RBP27.79■■■□□ 2.04
Ttc39a-201ENSMUST00000064129 Gab3Q8BSM5 595 aa27.74■■■□□ 2.03
Ttc39a-201ENSMUST00000064129 Fmn1Q05860 1466 aa27.71■■■□□ 2.03
Ttc39a-201ENSMUST00000064129 Wdr62Q3U3T8 1523 aa27.64■■■□□ 2.02
Ttc39a-201ENSMUST00000064129 Frmpd1A2AKB4 1549 aa27.62■■■□□ 2.01
Ttc39a-201ENSMUST00000064129 Rpgrip1Q9EPQ2 1331 aa27.62■■■□□ 2.01
Ttc39a-201ENSMUST00000064129 Acin1Q9JIX8 1338 aaKnown RBP27.56■■■□□ 2
Ttc39a-201ENSMUST00000064129 Top2aQ01320 1528 aaKnown RBP27.54■■■□□ 2
Ttc39a-201ENSMUST00000064129 Ercc6F8VPZ5 1481 aa27.51■■□□□ 1.99
Ttc39a-201ENSMUST00000064129 TnnQ80Z71 1560 aa27.44■■□□□ 1.98
Ttc39a-201ENSMUST00000064129 Rapgef2Q8CHG7 1496 aa27.34■■□□□ 1.97
Ttc39a-201ENSMUST00000064129 Unc13aQ4KUS2 1712 aa27.33■■□□□ 1.97
Ttc39a-201ENSMUST00000064129 Lamc3Q9R0B6 1581 aa27.28■■□□□ 1.96
Ttc39a-201ENSMUST00000064129 Thoc2B1AZI6 1594 aaKnown RBP27.26■■□□□ 1.95
Ttc39a-201ENSMUST00000064129 Kif15Q6P9L6 1387 aa27.16■■□□□ 1.94
Ttc39a-201ENSMUST00000064129 Cep162Q6ZQ06 1403 aa27.11■■□□□ 1.93
Ttc39a-201ENSMUST00000064129 Phldb1Q6PDH0 1371 aaKnown RBP27.05■■□□□ 1.92
Ttc39a-201ENSMUST00000064129 Camsap1A2AHC3 1581 aa27.01■■□□□ 1.92
Ttc39a-201ENSMUST00000064129 Eif4g1Q6NZJ6 1600 aaKnown RBP27■■□□□ 1.91
Ttc39a-201ENSMUST00000064129 Npm2Q80W85 207 aa26.97■■□□□ 1.91
Ttc39a-201ENSMUST00000064129 Fam135aQ6NS59 1506 aa26.93■■□□□ 1.9
Ttc39a-201ENSMUST00000064129 Il27Q8K3I6 234 aa26.9■■□□□ 1.9
Ttc39a-201ENSMUST00000064129 PtprkP35822 1457 aa26.89■■□□□ 1.89
Ttc39a-201ENSMUST00000064129 Ccdc18Q640L5 1455 aa26.87■■□□□ 1.89
Ttc39a-201ENSMUST00000064129 Myt1lP97500 1187 aa26.87■■□□□ 1.89
Ttc39a-201ENSMUST00000064129 NrkQ9R0G8 1455 aa26.85■■□□□ 1.89
Ttc39a-201ENSMUST00000064129 Shroom4Q1W617 1475 aa26.81■■□□□ 1.88
Ttc39a-201ENSMUST00000064129 Arhgap35Q91YM2 1499 aa26.79■■□□□ 1.88
Ttc39a-201ENSMUST00000064129 Ubl4bQ9CQ84 188 aa26.79■■□□□ 1.88
Ttc39a-201ENSMUST00000064129 Cux2P70298 1426 aa26.79■■□□□ 1.88
Ttc39a-201ENSMUST00000064129 Grin2bQ01097 1482 aa26.79■■□□□ 1.88
Ttc39a-201ENSMUST00000064129 Map3k1P53349 1493 aa26.63■■□□□ 1.85
Ttc39a-201ENSMUST00000064129 Dnajc5bQ9CQ94 199 aa26.6■■□□□ 1.85
Ttc39a-201ENSMUST00000064129 Npm1Q61937 292 aaKnown RBP26.58■■□□□ 1.85
Ttc39a-201ENSMUST00000064129 Clip1Q922J3 1391 aa26.58■■□□□ 1.85
Ttc39a-201ENSMUST00000064129 Mier1Q5UAK0 511 aa26.55■■□□□ 1.84
Ttc39a-201ENSMUST00000064129 LrpprcQ6PB66 1392 aaKnown RBP26.52■■□□□ 1.84
Ttc39a-201ENSMUST00000064129 Mroh2bQ7M6Y6 1581 aa26.52■■□□□ 1.84
Ttc39a-201ENSMUST00000064129 Baz1bQ9Z277 1479 aa26.49■■□□□ 1.83
Ttc39a-201ENSMUST00000064129 PogzQ8BZH4 1409 aaKnown RBP26.49■■□□□ 1.83
Ttc39a-201ENSMUST00000064129 Efcab5A0JP43 1406 aa26.46■■□□□ 1.83
Ttc39a-201ENSMUST00000064129 UbtfP25976 765 aaKnown RBP26.46■■□□□ 1.83
Ttc39a-201ENSMUST00000064129 Zeb1Q64318 1117 aa26.43■■□□□ 1.82
Ttc39a-201ENSMUST00000064129 Eea1Q8BL66 1411 aa26.43■■□□□ 1.82
Ttc39a-201ENSMUST00000064129 Duox2A2AQ99 1517 aa26.43■■□□□ 1.82
Ttc39a-201ENSMUST00000064129 Arap1Q4LDD4 1452 aa26.41■■□□□ 1.82
Ttc39a-201ENSMUST00000064129 AqrQ8CFQ3 1481 aaKnown RBP26.39■■□□□ 1.82
Ttc39a-201ENSMUST00000064129 Plekhg3Q4VAC9 1341 aa26.34■■□□□ 1.81
Ttc39a-201ENSMUST00000064129 Mrc2Q64449 1479 aa26.34■■□□□ 1.81
Ttc39a-201ENSMUST00000064129 Dhx29Q6PGC1 1365 aaKnown RBP26.34■■□□□ 1.81
Ttc39a-201ENSMUST00000064129 Setd5Q5XJV7 1441 aa26.33■■□□□ 1.81
Ttc39a-201ENSMUST00000064129 Arhgef5E9Q7D5 1581 aa26.3■■□□□ 1.8
Ttc39a-201ENSMUST00000064129 NefmP08553 848 aa26.3■■□□□ 1.8
Ttc39a-201ENSMUST00000064129 Samd9lQ69Z37 1561 aa26.29■■□□□ 1.8
Ttc39a-201ENSMUST00000064129 Ankrd26Q811D2 1581 aa26.28■■□□□ 1.8
Ttc39a-201ENSMUST00000064129 Kif21aQ9QXL2 1672 aa26.27■■□□□ 1.8
Ttc39a-201ENSMUST00000064129 Erich3F6QRE9 1637 aa26.27■■□□□ 1.8
Ttc39a-201ENSMUST00000064129 Carmil1Q6EDY6 1374 aa26.24■■□□□ 1.79
Ttc39a-201ENSMUST00000064129 SynmQ70IV5 1561 aa26.21■■□□□ 1.79
Ttc39a-201ENSMUST00000064129 Ap3b1Q9Z1T1 1105 aa26.21■■□□□ 1.79
Ttc39a-201ENSMUST00000064129 Crocc2F6XLV1 1638 aa26.21■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms