Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Gm12896-201ENSMUST00000118430 226 ntBASIC17.56■□□□□ 0.4
Pfdn6Q03958 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.55■□□□□ 0.4
Pfdn6Q03958 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn6Q03958 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn6Q03958 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Gm12441-201ENSMUST00000121806 588 ntBASIC17.53■□□□□ 0.4
Pfdn6Q03958 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.53■□□□□ 0.4
Pfdn6Q03958 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn6Q03958 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Pfdn6Q03958 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.52■□□□□ 0.4
Pfdn6Q03958 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pfdn6Q03958 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pfdn6Q03958 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms