Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Gm20760-201ENSMUST00000179197 648 ntBASIC17.85■□□□□ 0.45
Thumpd3P97770 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd3P97770 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Thumpd3P97770 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.84■□□□□ 0.45
Thumpd3P97770 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Gm12527-201ENSMUST00000117967 564 ntBASIC17.84■□□□□ 0.45
Thumpd3P97770 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd3P97770 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Thumpd3P97770 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thumpd3P97770 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.83■□□□□ 0.45
Thumpd3P97770 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thumpd3P97770 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Thumpd3P97770 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thumpd3P97770 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.83■□□□□ 0.44
Thumpd3P97770 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Thumpd3P97770 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd3P97770 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.82■□□□□ 0.44
Thumpd3P97770 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.82■□□□□ 0.44
Thumpd3P97770 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.82■□□□□ 0.44
Thumpd3P97770 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd3P97770 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd3P97770 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.81■□□□□ 0.44
Thumpd3P97770 Gm8969-201ENSMUST00000199694 526 ntBASIC17.81■□□□□ 0.44
Thumpd3P97770 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Thumpd3P97770 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Thumpd3P97770 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd3P97770 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Thumpd3P97770 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Thumpd3P97770 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Thumpd3P97770 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms