Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc4a4O88343 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.77■□□□□ 0.92
Slc4a4O88343 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc4a4O88343 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.77■□□□□ 0.92
Slc4a4O88343 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc4a4O88343 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc4a4O88343 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc4a4O88343 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc4a4O88343 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Slc4a4O88343 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc4a4O88343 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
Slc4a4O88343 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc4a4O88343 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Slc4a4O88343 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc4a4O88343 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc4a4O88343 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.76■□□□□ 0.91
Slc4a4O88343 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.76■□□□□ 0.91
Slc4a4O88343 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Slc4a4O88343 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.76■□□□□ 0.91
Slc4a4O88343 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Slc4a4O88343 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Slc4a4O88343 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc4a4O88343 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Slc4a4O88343 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc4a4O88343 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Gm38027-201ENSMUST00000192315 235 ntBASIC20.74■□□□□ 0.91
Slc4a4O88343 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.74■□□□□ 0.91
Slc4a4O88343 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.74■□□□□ 0.91
Slc4a4O88343 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc4a4O88343 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slc4a4O88343 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Slc4a4O88343 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Slc4a4O88343 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Gm43799-201ENSMUST00000201845 579 ntBASIC20.73■□□□□ 0.91
Slc4a4O88343 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.73■□□□□ 0.91
Slc4a4O88343 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc4a4O88343 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc4a4O88343 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Slc4a4O88343 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Gm24841-201ENSMUST00000158676 357 ntBASIC20.72■□□□□ 0.91
Slc4a4O88343 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Slc4a4O88343 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.72■□□□□ 0.91
Slc4a4O88343 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.72■□□□□ 0.91
Slc4a4O88343 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Slc4a4O88343 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc4a4O88343 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Slc4a4O88343 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Slc4a4O88343 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc4a4O88343 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms