Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smco4Q9JIS3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm7332-201ENSMUST00000118351 454 ntBASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm27502-201ENSMUST00000183495 199 ntBASIC14.29□□□□□ -0.12
Smco4Q9JIS3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smco4Q9JIS3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco4Q9JIS3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco4Q9JIS3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco4Q9JIS3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smco4Q9JIS3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco4Q9JIS3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Smco4Q9JIS3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco4Q9JIS3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco4Q9JIS3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms