Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc4a4O88343 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc4a4O88343 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc4a4O88343 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.89■□□□□ 0.93
Slc4a4O88343 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc4a4O88343 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.89■□□□□ 0.93
Slc4a4O88343 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.89■□□□□ 0.93
Slc4a4O88343 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.89■□□□□ 0.93
Slc4a4O88343 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Slc4a4O88343 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc4a4O88343 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc4a4O88343 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc4a4O88343 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Slc4a4O88343 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Slc4a4O88343 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Slc4a4O88343 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.88■□□□□ 0.93
Slc4a4O88343 Gm21814-202ENSMUST00000203277 873 ntBASIC20.88■□□□□ 0.93
Slc4a4O88343 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc4a4O88343 Timm23-208ENSMUST00000226683 750 ntBASIC20.88■□□□□ 0.93
Slc4a4O88343 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc4a4O88343 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a4O88343 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Slc4a4O88343 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a4O88343 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a4O88343 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Slc4a4O88343 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc4a4O88343 Gm15565-201ENSMUST00000118890 427 ntBASIC20.87■□□□□ 0.93
Slc4a4O88343 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc4a4O88343 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a4O88343 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a4O88343 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a4O88343 Idnk-204ENSMUST00000226010 1898 ntBASIC20.87■□□□□ 0.93
Slc4a4O88343 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a4O88343 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Slc4a4O88343 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 Mir7071-201ENSMUST00000184847 69 ntBASIC20.86■□□□□ 0.93
Slc4a4O88343 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.86■□□□□ 0.93
Slc4a4O88343 Gm4974-201ENSMUST00000209974 875 ntBASIC20.86■□□□□ 0.93
Slc4a4O88343 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a4O88343 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc4a4O88343 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Slc4a4O88343 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Slc4a4O88343 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.85■□□□□ 0.93
Slc4a4O88343 Gm12085-201ENSMUST00000119263 940 ntBASIC20.85■□□□□ 0.93
Slc4a4O88343 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Slc4a4O88343 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.85■□□□□ 0.93
Slc4a4O88343 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Grk6-206ENSMUST00000224995 2971 ntBASIC20.85■□□□□ 0.93
Slc4a4O88343 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slc4a4O88343 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc4a4O88343 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Slc4a4O88343 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Slc4a4O88343 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc4a4O88343 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc4a4O88343 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc4a4O88343 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc4a4O88343 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.84■□□□□ 0.93
Slc4a4O88343 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc4a4O88343 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Slc4a4O88343 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc4a4O88343 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc4a4O88343 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.84■□□□□ 0.93
Slc4a4O88343 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.84■□□□□ 0.93
Slc4a4O88343 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms