Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrif1Q8CDD9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrif1Q8CDD9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lrif1Q8CDD9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrif1Q8CDD9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrif1Q8CDD9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.52■□□□□ 0.39
Lrif1Q8CDD9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrif1Q8CDD9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Lrif1Q8CDD9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Lrif1Q8CDD9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrif1Q8CDD9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrif1Q8CDD9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms