Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YGL024WYGL024W 336 nt4.07□□□□□ -1.76
TY1A-PR2P0CX60 RPL20BYOR312C 519 nt4.07□□□□□ -1.76
TY1A-PR2P0CX60 TAF5YBR198C 2397 nt4.07□□□□□ -1.76
TY1A-PR2P0CX60 SLM2YNL047C 1971 nt4.07□□□□□ -1.76
TY1A-PR2P0CX60 PWP2YCR057C 2772 nt4.07□□□□□ -1.76
TY1A-PR2P0CX60 DOT6YER088C 2013 nt4.06□□□□□ -1.76
TY1A-PR2P0CX60 YCR095W-AYCR095W-A 159 nt4.06□□□□□ -1.76
TY1A-PR2P0CX60 SWC7YLR385C 399 nt4.06□□□□□ -1.76
TY1A-PR2P0CX60 YBR230W-AYBR230W-A 201 nt4.06□□□□□ -1.76
TY1A-PR2P0CX60 POL1YNL102W 4407 nt4.06□□□□□ -1.76
TY1A-PR2P0CX60 VHS3YOR054C 2025 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 YGL069CYGL069C 465 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 YLR154W-BYLR154W-B 165 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 YMR324CYMR324C 243 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 YOL097W-AYOL097W-A 186 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 YOR218CYOR218C 420 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 HFM1YGL251C 3564 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 HEH2YDR458C 1992 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 IPT1YDR072C 1584 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 PMC1YGL006W 3522 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 YOL075CYOL075C 3885 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 PIM1YBL022C 3402 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 KEL2YGR238C 2649 nt4.05□□□□□ -1.76
TY1A-PR2P0CX60 GAL11YOL051W 3246 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 HSC82YMR186W 2118 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 RSC1YGR056W 2787 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 YLR154W-AYLR154W-A 186 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 YLR416CYLR416C 399 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 ACM1YPL267W 630 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 snR191snR191 274 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 KAR3YPR141C 2190 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 COS111YBR203W 2775 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 MCM10YIL150C 1716 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 RIX1YHR197W 2292 nt4.04□□□□□ -1.76
TY1A-PR2P0CX60 LYS2YBR115C 4179 nt4.03□□□□□ -1.76
TY1A-PR2P0CX60 PRE4YFR050C 801 nt4.03□□□□□ -1.76
TY1A-PR2P0CX60 GAT4YIR013C 366 nt4.03□□□□□ -1.76
TY1A-PR2P0CX60 YNL097W-AYNL097W-A 156 nt4.03□□□□□ -1.76
TY1A-PR2P0CX60 YBR277CYBR277C 402 nt4.03□□□□□ -1.76
TY1A-PR2P0CX60 PLC1YPL268W 2610 nt4.03□□□□□ -1.76
TY1A-PR2P0CX60 TFC8YPL007C 1767 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 YER053C-AYER053C-A 114 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 ISA1YLL027W 753 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 RPB10YOR210W 213 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 YBR221W-AYBR221W-A 105 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 DUF1YOL087C 3351 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 ABP140YOR239W 1887 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 YEL043WYEL043W 2871 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 IOC2YLR095C 2439 nt4.02□□□□□ -1.77
TY1A-PR2P0CX60 RAD1YPL022W 3303 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 MET4YNL103W 2019 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 YDR182W-AYDR182W-A 204 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 YDR246W-AYDR246W-A 201 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 LSO2YGR169C-A 279 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 YPR014CYPR014C 330 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 VID27YNL212W 2349 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 PUF3YLL013C 2640 nt4.01□□□□□ -1.77
TY1A-PR2P0CX60 YCF1YDR135C 4548 nt4□□□□□ -1.77
TY1A-PR2P0CX60 YMR196WYMR196W 3267 nt4□□□□□ -1.77
TY1A-PR2P0CX60 TEL1YBL088C 8364 nt4□□□□□ -1.77
TY1A-PR2P0CX60 YLL066W-BYLL066W-B 171 nt4□□□□□ -1.77
TY1A-PR2P0CX60 YLR282CYLR282C 342 nt4□□□□□ -1.77
TY1A-PR2P0CX60 FOX2YKR009C 2703 nt4□□□□□ -1.77
TY1A-PR2P0CX60 PDR5YOR153W 4536 nt4□□□□□ -1.77
TY1A-PR2P0CX60 RNR1YER070W 2667 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 SIR3YLR442C 2937 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 CIN1YOR349W 3045 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 GIN4YDR507C 3429 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 YGL041C-BYGL041C-B 183 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 RAM2YKL019W 951 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 YBL065WYBL065W 345 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 YOR345CYOR345C 351 nt3.99□□□□□ -1.77
TY1A-PR2P0CX60 EFR3YMR212C 2349 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 APC11YDL008W 498 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 YDR193WYDR193W 399 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 YOR333CYOR333C 417 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 RPS23BYPR132W 438 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 OM14YBR230C 405 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 CPA2YJR109C 3357 nt3.98□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)CtK(CUU)C 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)D1tK(CUU)D1 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)D2tK(CUU)D2 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)E1tK(CUU)E1 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)E2tK(CUU)E2 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)FtK(CUU)F 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)G1tK(CUU)G1 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)G2tK(CUU)G2 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)G3tK(CUU)G3 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)ItK(CUU)I 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)JtK(CUU)J 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)KtK(CUU)K 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)MtK(CUU)M 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 tK(CUU)PtK(CUU)P 73 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 COG3YER157W 2406 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 ELG1YOR144C 2376 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 PAN3YKL025C 2040 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 COY1YKL179C 2040 nt3.97□□□□□ -1.77
TY1A-PR2P0CX60 YGL036WYGL036W 2730 nt3.96□□□□□ -1.78
TY1A-PR2P0CX60 SEN1YLR430W 6696 nt3.96□□□□□ -1.78
TY1A-PR2P0CX60 YOR072W-BYOR072W-B 162 nt3.96□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 43.6 ms