Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.52■■□□□ 1.36
Atp6v1c1Q9Z1G3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.52■■□□□ 1.36
Atp6v1c1Q9Z1G3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Atp6v1c1Q9Z1G3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp6v1c1Q9Z1G3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp6v1c1Q9Z1G3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Atp6v1c1Q9Z1G3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp6v1c1Q9Z1G3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Atp6v1c1Q9Z1G3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atp6v1c1Q9Z1G3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Atp6v1c1Q9Z1G3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Atp6v1c1Q9Z1G3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Atp6v1c1Q9Z1G3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Atp6v1c1Q9Z1G3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Atp6v1c1Q9Z1G3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Atp6v1c1Q9Z1G3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp6v1c1Q9Z1G3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Atp6v1c1Q9Z1G3 Peli2-204ENSMUST00000226513 1320 ntBASIC23.45■■□□□ 1.34
Atp6v1c1Q9Z1G3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Atp6v1c1Q9Z1G3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Atp6v1c1Q9Z1G3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Atp6v1c1Q9Z1G3 Gm24804-201ENSMUST00000174982 85 ntBASIC23.44■■□□□ 1.34
Atp6v1c1Q9Z1G3 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.44■■□□□ 1.34
Atp6v1c1Q9Z1G3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Atp6v1c1Q9Z1G3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Atp6v1c1Q9Z1G3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Atp6v1c1Q9Z1G3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Atp6v1c1Q9Z1G3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.41■■□□□ 1.34
Atp6v1c1Q9Z1G3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Atp6v1c1Q9Z1G3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp6v1c1Q9Z1G3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp6v1c1Q9Z1G3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp6v1c1Q9Z1G3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Atp6v1c1Q9Z1G3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Atp6v1c1Q9Z1G3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Atp6v1c1Q9Z1G3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Atp6v1c1Q9Z1G3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp6v1c1Q9Z1G3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Atp6v1c1Q9Z1G3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp6v1c1Q9Z1G3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Atp6v1c1Q9Z1G3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Atp6v1c1Q9Z1G3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Atp6v1c1Q9Z1G3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Atp6v1c1Q9Z1G3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Atp6v1c1Q9Z1G3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Atp6v1c1Q9Z1G3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Atp6v1c1Q9Z1G3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Atp6v1c1Q9Z1G3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Atp6v1c1Q9Z1G3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Atp6v1c1Q9Z1G3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Atp6v1c1Q9Z1G3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Atp6v1c1Q9Z1G3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Atp6v1c1Q9Z1G3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.32■■□□□ 1.32
Atp6v1c1Q9Z1G3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Atp6v1c1Q9Z1G3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.32■■□□□ 1.32
Atp6v1c1Q9Z1G3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Atp6v1c1Q9Z1G3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Atp6v1c1Q9Z1G3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atp6v1c1Q9Z1G3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Atp6v1c1Q9Z1G3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Atp6v1c1Q9Z1G3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Atp6v1c1Q9Z1G3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Atp6v1c1Q9Z1G3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Atp6v1c1Q9Z1G3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atp6v1c1Q9Z1G3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.28■■□□□ 1.32
Atp6v1c1Q9Z1G3 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.28■■□□□ 1.32
Atp6v1c1Q9Z1G3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Atp6v1c1Q9Z1G3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atp6v1c1Q9Z1G3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
Atp6v1c1Q9Z1G3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Atp6v1c1Q9Z1G3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.26■■□□□ 1.31
Atp6v1c1Q9Z1G3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Atp6v1c1Q9Z1G3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Atp6v1c1Q9Z1G3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atp6v1c1Q9Z1G3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.25■■□□□ 1.31
Atp6v1c1Q9Z1G3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Atp6v1c1Q9Z1G3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Atp6v1c1Q9Z1G3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Atp6v1c1Q9Z1G3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Atp6v1c1Q9Z1G3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Atp6v1c1Q9Z1G3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Atp6v1c1Q9Z1G3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Atp6v1c1Q9Z1G3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Atp6v1c1Q9Z1G3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Atp6v1c1Q9Z1G3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Atp6v1c1Q9Z1G3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Atp6v1c1Q9Z1G3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Atp6v1c1Q9Z1G3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Atp6v1c1Q9Z1G3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Atp6v1c1Q9Z1G3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Atp6v1c1Q9Z1G3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Atp6v1c1Q9Z1G3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.21■■□□□ 1.31
Atp6v1c1Q9Z1G3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atp6v1c1Q9Z1G3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atp6v1c1Q9Z1G3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Atp6v1c1Q9Z1G3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atp6v1c1Q9Z1G3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Atp6v1c1Q9Z1G3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Atp6v1c1Q9Z1G3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Atp6v1c1Q9Z1G3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms