Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf8Q99PV0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf8Q99PV0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf8Q99PV0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf8Q99PV0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20■□□□□ 0.79
Prpf8Q99PV0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20■□□□□ 0.79
Prpf8Q99PV0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
Prpf8Q99PV0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf8Q99PV0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf8Q99PV0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf8Q99PV0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prpf8Q99PV0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf8Q99PV0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.97■□□□□ 0.79
Prpf8Q99PV0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf8Q99PV0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf8Q99PV0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf8Q99PV0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf8Q99PV0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf8Q99PV0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf8Q99PV0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf8Q99PV0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf8Q99PV0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Prpf8Q99PV0 Mir6538-201ENSMUST00000183713 110 ntBASIC19.92■□□□□ 0.78
Prpf8Q99PV0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf8Q99PV0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf8Q99PV0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf8Q99PV0 Gm11175-201ENSMUST00000116172 543 ntBASIC19.91■□□□□ 0.78
Prpf8Q99PV0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf8Q99PV0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf8Q99PV0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Prpf8Q99PV0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf8Q99PV0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf8Q99PV0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf8Q99PV0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf8Q99PV0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Prpf8Q99PV0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
Prpf8Q99PV0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf8Q99PV0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf8Q99PV0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf8Q99PV0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.87■□□□□ 0.77
Prpf8Q99PV0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf8Q99PV0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.86■□□□□ 0.77
Prpf8Q99PV0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf8Q99PV0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf8Q99PV0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf8Q99PV0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf8Q99PV0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf8Q99PV0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.81■□□□□ 0.76
Prpf8Q99PV0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.81■□□□□ 0.76
Prpf8Q99PV0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.81■□□□□ 0.76
Prpf8Q99PV0 Cap2-205ENSMUST00000225824 1634 ntBASIC19.81■□□□□ 0.76
Prpf8Q99PV0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Prpf8Q99PV0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prpf8Q99PV0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prpf8Q99PV0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf8Q99PV0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf8Q99PV0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf8Q99PV0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf8Q99PV0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf8Q99PV0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf8Q99PV0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.77■□□□□ 0.76
Prpf8Q99PV0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.77■□□□□ 0.76
Prpf8Q99PV0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Prpf8Q99PV0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf8Q99PV0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.76■□□□□ 0.75
Prpf8Q99PV0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf8Q99PV0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf8Q99PV0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf8Q99PV0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.75■□□□□ 0.75
Prpf8Q99PV0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf8Q99PV0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf8Q99PV0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Prpf8Q99PV0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf8Q99PV0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf8Q99PV0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf8Q99PV0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf8Q99PV0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf8Q99PV0 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf8Q99PV0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.68■□□□□ 0.74
Prpf8Q99PV0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf8Q99PV0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf8Q99PV0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf8Q99PV0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf8Q99PV0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.66■□□□□ 0.74
Prpf8Q99PV0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms