Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Pcdhb18Q91Y02 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb18Q91Y02 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb18Q91Y02 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb18Q91Y02 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.58■■□□□ 1.69
Pcdhb18Q91Y02 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Pcdhb18Q91Y02 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdhb18Q91Y02 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb18Q91Y02 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb18Q91Y02 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb18Q91Y02 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.56■■□□□ 1.68
Pcdhb18Q91Y02 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
Pcdhb18Q91Y02 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb18Q91Y02 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb18Q91Y02 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb18Q91Y02 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb18Q91Y02 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb18Q91Y02 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb18Q91Y02 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.51■■□□□ 1.67
Pcdhb18Q91Y02 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb18Q91Y02 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb18Q91Y02 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb18Q91Y02 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb18Q91Y02 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Pcdhb18Q91Y02 Gm11599-201ENSMUST00000118720 878 ntBASIC25.46■■□□□ 1.67
Pcdhb18Q91Y02 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Pcdhb18Q91Y02 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.45■■□□□ 1.66
Pcdhb18Q91Y02 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb18Q91Y02 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.43■■□□□ 1.66
Pcdhb18Q91Y02 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb18Q91Y02 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.42■■□□□ 1.66
Pcdhb18Q91Y02 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb18Q91Y02 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Pcdhb18Q91Y02 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb18Q91Y02 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.41■■□□□ 1.66
Pcdhb18Q91Y02 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb18Q91Y02 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.4■■□□□ 1.66
Pcdhb18Q91Y02 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdhb18Q91Y02 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb18Q91Y02 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb18Q91Y02 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb18Q91Y02 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb18Q91Y02 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb18Q91Y02 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.38■■□□□ 1.65
Pcdhb18Q91Y02 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.37■■□□□ 1.65
Pcdhb18Q91Y02 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb18Q91Y02 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb18Q91Y02 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb18Q91Y02 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb18Q91Y02 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb18Q91Y02 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.35■■□□□ 1.65
Pcdhb18Q91Y02 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.35■■□□□ 1.65
Pcdhb18Q91Y02 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb18Q91Y02 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb18Q91Y02 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
Pcdhb18Q91Y02 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb18Q91Y02 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb18Q91Y02 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb18Q91Y02 Zxda-201ENSMUST00000117281 2621 ntBASIC25.32■■□□□ 1.64
Pcdhb18Q91Y02 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb18Q91Y02 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb18Q91Y02 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.3■■□□□ 1.64
Pcdhb18Q91Y02 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
Pcdhb18Q91Y02 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb18Q91Y02 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb18Q91Y02 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Pcdhb18Q91Y02 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.29■■□□□ 1.64
Pcdhb18Q91Y02 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb18Q91Y02 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb18Q91Y02 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb18Q91Y02 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb18Q91Y02 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.28■■□□□ 1.64
Pcdhb18Q91Y02 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb18Q91Y02 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb18Q91Y02 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb18Q91Y02 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb18Q91Y02 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Pcdhb18Q91Y02 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.26■■□□□ 1.63
Pcdhb18Q91Y02 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb18Q91Y02 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhb18Q91Y02 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhb18Q91Y02 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb18Q91Y02 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb18Q91Y02 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.22■■□□□ 1.63
Pcdhb18Q91Y02 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Pcdhb18Q91Y02 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Pcdhb18Q91Y02 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb18Q91Y02 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.2■■□□□ 1.62
Pcdhb18Q91Y02 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb18Q91Y02 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb18Q91Y02 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.18■■□□□ 1.62
Pcdhb18Q91Y02 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb18Q91Y02 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb18Q91Y02 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Pcdhb18Q91Y02 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.17■■□□□ 1.62
Pcdhb18Q91Y02 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb18Q91Y02 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Pcdhb18Q91Y02 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.15■■□□□ 1.62
Pcdhb18Q91Y02 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb18Q91Y02 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.14■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms