Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.88■■□□□ 1.73
Pcdhb2Q91Y00 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb2Q91Y00 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.87■■□□□ 1.73
Pcdhb2Q91Y00 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhb2Q91Y00 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.86■■□□□ 1.73
Pcdhb2Q91Y00 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb2Q91Y00 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb2Q91Y00 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhb2Q91Y00 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhb2Q91Y00 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhb2Q91Y00 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Pcdhb2Q91Y00 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhb2Q91Y00 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb2Q91Y00 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb2Q91Y00 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.82■■□□□ 1.72
Pcdhb2Q91Y00 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.82■■□□□ 1.72
Pcdhb2Q91Y00 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb2Q91Y00 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb2Q91Y00 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb2Q91Y00 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb2Q91Y00 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Pcdhb2Q91Y00 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.78■■□□□ 1.72
Pcdhb2Q91Y00 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.78■■□□□ 1.72
Pcdhb2Q91Y00 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.78■■□□□ 1.72
Pcdhb2Q91Y00 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb2Q91Y00 Gm6821-201ENSMUST00000107540 542 ntBASIC25.76■■□□□ 1.71
Pcdhb2Q91Y00 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb2Q91Y00 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb2Q91Y00 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb2Q91Y00 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb2Q91Y00 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb2Q91Y00 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb2Q91Y00 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb2Q91Y00 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb2Q91Y00 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Pcdhb2Q91Y00 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Pcdhb2Q91Y00 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb2Q91Y00 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb2Q91Y00 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb2Q91Y00 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb2Q91Y00 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb2Q91Y00 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.72■■□□□ 1.71
Pcdhb2Q91Y00 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb2Q91Y00 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.72■■□□□ 1.71
Pcdhb2Q91Y00 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb2Q91Y00 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb2Q91Y00 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb2Q91Y00 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Pcdhb2Q91Y00 Nkain2-201ENSMUST00000092602 558 ntBASIC25.69■■□□□ 1.7
Pcdhb2Q91Y00 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Pcdhb2Q91Y00 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb2Q91Y00 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb2Q91Y00 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb2Q91Y00 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb2Q91Y00 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb2Q91Y00 Gm8503-201ENSMUST00000118131 455 ntBASIC25.65■■□□□ 1.7
Pcdhb2Q91Y00 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.65■■□□□ 1.7
Pcdhb2Q91Y00 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb2Q91Y00 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb2Q91Y00 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb2Q91Y00 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Pcdhb2Q91Y00 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb2Q91Y00 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.62■■□□□ 1.69
Pcdhb2Q91Y00 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb2Q91Y00 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb2Q91Y00 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Pcdhb2Q91Y00 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb2Q91Y00 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.61■■□□□ 1.69
Pcdhb2Q91Y00 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.61■■□□□ 1.69
Pcdhb2Q91Y00 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.61■■□□□ 1.69
Pcdhb2Q91Y00 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Pcdhb2Q91Y00 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Pcdhb2Q91Y00 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb2Q91Y00 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb2Q91Y00 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
Pcdhb2Q91Y00 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb2Q91Y00 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb2Q91Y00 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb2Q91Y00 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb2Q91Y00 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb2Q91Y00 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb2Q91Y00 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb2Q91Y00 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb2Q91Y00 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb2Q91Y00 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.55■■□□□ 1.68
Pcdhb2Q91Y00 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.55■■□□□ 1.68
Pcdhb2Q91Y00 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb2Q91Y00 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb2Q91Y00 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.53■■□□□ 1.68
Pcdhb2Q91Y00 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.53■■□□□ 1.68
Pcdhb2Q91Y00 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb2Q91Y00 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb2Q91Y00 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb2Q91Y00 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Pcdhb2Q91Y00 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb2Q91Y00 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb2Q91Y00 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb2Q91Y00 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
Pcdhb2Q91Y00 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.49■■□□□ 1.67
Pcdhb2Q91Y00 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms