Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb8Q91XZ2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.72■■□□□ 1.39
Pcdhb8Q91XZ2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb8Q91XZ2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb8Q91XZ2 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.71■■□□□ 1.39
Pcdhb8Q91XZ2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb8Q91XZ2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb8Q91XZ2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb8Q91XZ2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.69■■□□□ 1.38
Pcdhb8Q91XZ2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.69■■□□□ 1.38
Pcdhb8Q91XZ2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb8Q91XZ2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb8Q91XZ2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb8Q91XZ2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb8Q91XZ2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdhb8Q91XZ2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb8Q91XZ2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb8Q91XZ2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb8Q91XZ2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
Pcdhb8Q91XZ2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb8Q91XZ2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb8Q91XZ2 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.63■■□□□ 1.37
Pcdhb8Q91XZ2 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.63■■□□□ 1.37
Pcdhb8Q91XZ2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb8Q91XZ2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb8Q91XZ2 Gm9397-201ENSMUST00000200125 605 ntBASIC23.62■■□□□ 1.37
Pcdhb8Q91XZ2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.61■■□□□ 1.37
Pcdhb8Q91XZ2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Pcdhb8Q91XZ2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb8Q91XZ2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb8Q91XZ2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb8Q91XZ2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb8Q91XZ2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb8Q91XZ2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb8Q91XZ2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.59■■□□□ 1.37
Pcdhb8Q91XZ2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Pcdhb8Q91XZ2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.59■■□□□ 1.37
Pcdhb8Q91XZ2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.59■■□□□ 1.37
Pcdhb8Q91XZ2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb8Q91XZ2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb8Q91XZ2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb8Q91XZ2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb8Q91XZ2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb8Q91XZ2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhb8Q91XZ2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdhb8Q91XZ2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb8Q91XZ2 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.55■■□□□ 1.36
Pcdhb8Q91XZ2 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.55■■□□□ 1.36
Pcdhb8Q91XZ2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.54■■□□□ 1.36
Pcdhb8Q91XZ2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb8Q91XZ2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb8Q91XZ2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb8Q91XZ2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Pcdhb8Q91XZ2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb8Q91XZ2 Gm24970-201ENSMUST00000175582 82 ntBASIC23.52■■□□□ 1.36
Pcdhb8Q91XZ2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb8Q91XZ2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb8Q91XZ2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb8Q91XZ2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb8Q91XZ2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb8Q91XZ2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb8Q91XZ2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Pcdhb8Q91XZ2 Gm45855-201ENSMUST00000212546 880 ntBASIC23.48■■□□□ 1.35
Pcdhb8Q91XZ2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb8Q91XZ2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.48■■□□□ 1.35
Pcdhb8Q91XZ2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb8Q91XZ2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.46■■□□□ 1.35
Pcdhb8Q91XZ2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb8Q91XZ2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Pcdhb8Q91XZ2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Pcdhb8Q91XZ2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb8Q91XZ2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.44■■□□□ 1.34
Pcdhb8Q91XZ2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb8Q91XZ2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb8Q91XZ2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb8Q91XZ2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Pcdhb8Q91XZ2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb8Q91XZ2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhb8Q91XZ2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb8Q91XZ2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb8Q91XZ2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb8Q91XZ2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhb8Q91XZ2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb8Q91XZ2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.38■■□□□ 1.33
Pcdhb8Q91XZ2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.38■■□□□ 1.33
Pcdhb8Q91XZ2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb8Q91XZ2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb8Q91XZ2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb8Q91XZ2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
Pcdhb8Q91XZ2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb8Q91XZ2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcdhb8Q91XZ2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb8Q91XZ2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb8Q91XZ2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb8Q91XZ2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb8Q91XZ2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb8Q91XZ2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb8Q91XZ2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Pcdhb8Q91XZ2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Pcdhb8Q91XZ2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms