Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HnrnpuQ8VEK3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
HnrnpuQ8VEK3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.39■■■□□ 2.46
HnrnpuQ8VEK3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HnrnpuQ8VEK3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HnrnpuQ8VEK3 Gm24970-201ENSMUST00000175582 82 ntBASIC30.38■■■□□ 2.45
HnrnpuQ8VEK3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HnrnpuQ8VEK3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HnrnpuQ8VEK3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HnrnpuQ8VEK3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HnrnpuQ8VEK3 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.36■■■□□ 2.45
HnrnpuQ8VEK3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
HnrnpuQ8VEK3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
HnrnpuQ8VEK3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.35■■■□□ 2.45
HnrnpuQ8VEK3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HnrnpuQ8VEK3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.34■■■□□ 2.45
HnrnpuQ8VEK3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.34■■■□□ 2.45
HnrnpuQ8VEK3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HnrnpuQ8VEK3 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.33■■■□□ 2.45
HnrnpuQ8VEK3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
HnrnpuQ8VEK3 Gm45855-201ENSMUST00000212546 880 ntBASIC30.32■■■□□ 2.44
HnrnpuQ8VEK3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
HnrnpuQ8VEK3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.31■■■□□ 2.44
HnrnpuQ8VEK3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HnrnpuQ8VEK3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
HnrnpuQ8VEK3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
HnrnpuQ8VEK3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
HnrnpuQ8VEK3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
HnrnpuQ8VEK3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
HnrnpuQ8VEK3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.24■■■□□ 2.43
HnrnpuQ8VEK3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
HnrnpuQ8VEK3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
HnrnpuQ8VEK3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.21■■■□□ 2.43
HnrnpuQ8VEK3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
HnrnpuQ8VEK3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
HnrnpuQ8VEK3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
HnrnpuQ8VEK3 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.19■■■□□ 2.42
HnrnpuQ8VEK3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
HnrnpuQ8VEK3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
HnrnpuQ8VEK3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HnrnpuQ8VEK3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HnrnpuQ8VEK3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
HnrnpuQ8VEK3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
HnrnpuQ8VEK3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
HnrnpuQ8VEK3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
HnrnpuQ8VEK3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
HnrnpuQ8VEK3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
HnrnpuQ8VEK3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.14■■■□□ 2.42
HnrnpuQ8VEK3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
HnrnpuQ8VEK3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
HnrnpuQ8VEK3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.13■■■□□ 2.41
HnrnpuQ8VEK3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.12■■■□□ 2.41
HnrnpuQ8VEK3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.11■■■□□ 2.41
HnrnpuQ8VEK3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
HnrnpuQ8VEK3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
HnrnpuQ8VEK3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
HnrnpuQ8VEK3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
HnrnpuQ8VEK3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
HnrnpuQ8VEK3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
HnrnpuQ8VEK3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HnrnpuQ8VEK3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HnrnpuQ8VEK3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
HnrnpuQ8VEK3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
HnrnpuQ8VEK3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
HnrnpuQ8VEK3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
HnrnpuQ8VEK3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HnrnpuQ8VEK3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HnrnpuQ8VEK3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
HnrnpuQ8VEK3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
HnrnpuQ8VEK3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30■■■□□ 2.39
HnrnpuQ8VEK3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
HnrnpuQ8VEK3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HnrnpuQ8VEK3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HnrnpuQ8VEK3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
HnrnpuQ8VEK3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.96■■■□□ 2.39
HnrnpuQ8VEK3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
HnrnpuQ8VEK3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
HnrnpuQ8VEK3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
HnrnpuQ8VEK3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HnrnpuQ8VEK3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HnrnpuQ8VEK3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
HnrnpuQ8VEK3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
HnrnpuQ8VEK3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
HnrnpuQ8VEK3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HnrnpuQ8VEK3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
HnrnpuQ8VEK3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.89■■■□□ 2.38
HnrnpuQ8VEK3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
HnrnpuQ8VEK3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
HnrnpuQ8VEK3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HnrnpuQ8VEK3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.86■■■□□ 2.37
HnrnpuQ8VEK3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
HnrnpuQ8VEK3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
HnrnpuQ8VEK3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
HnrnpuQ8VEK3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
HnrnpuQ8VEK3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
HnrnpuQ8VEK3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
HnrnpuQ8VEK3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HnrnpuQ8VEK3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
HnrnpuQ8VEK3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HnrnpuQ8VEK3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms