Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sgms1Q8VCQ6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Sgms1Q8VCQ6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Sgms1Q8VCQ6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sgms1Q8VCQ6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sgms1Q8VCQ6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sgms1Q8VCQ6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sgms1Q8VCQ6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.52■■□□□ 1.84
Sgms1Q8VCQ6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sgms1Q8VCQ6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sgms1Q8VCQ6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.5■■□□□ 1.83
Sgms1Q8VCQ6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sgms1Q8VCQ6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sgms1Q8VCQ6 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.48■■□□□ 1.83
Sgms1Q8VCQ6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sgms1Q8VCQ6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sgms1Q8VCQ6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sgms1Q8VCQ6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sgms1Q8VCQ6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Sgms1Q8VCQ6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Sgms1Q8VCQ6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Sgms1Q8VCQ6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sgms1Q8VCQ6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sgms1Q8VCQ6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sgms1Q8VCQ6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.44■■□□□ 1.82
Sgms1Q8VCQ6 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.43■■□□□ 1.82
Sgms1Q8VCQ6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Sgms1Q8VCQ6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sgms1Q8VCQ6 Gm9397-201ENSMUST00000200125 605 ntBASIC26.41■■□□□ 1.82
Sgms1Q8VCQ6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sgms1Q8VCQ6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sgms1Q8VCQ6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sgms1Q8VCQ6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sgms1Q8VCQ6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Sgms1Q8VCQ6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sgms1Q8VCQ6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
Sgms1Q8VCQ6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.39■■□□□ 1.82
Sgms1Q8VCQ6 Gm45855-201ENSMUST00000212546 880 ntBASIC26.38■■□□□ 1.81
Sgms1Q8VCQ6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.38■■□□□ 1.81
Sgms1Q8VCQ6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sgms1Q8VCQ6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sgms1Q8VCQ6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.35■■□□□ 1.81
Sgms1Q8VCQ6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.35■■□□□ 1.81
Sgms1Q8VCQ6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.35■■□□□ 1.81
Sgms1Q8VCQ6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Sgms1Q8VCQ6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.34■■□□□ 1.81
Sgms1Q8VCQ6 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.34■■□□□ 1.81
Sgms1Q8VCQ6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sgms1Q8VCQ6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sgms1Q8VCQ6 Gm24970-201ENSMUST00000175582 82 ntBASIC26.33■■□□□ 1.81
Sgms1Q8VCQ6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.33■■□□□ 1.81
Sgms1Q8VCQ6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sgms1Q8VCQ6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sgms1Q8VCQ6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sgms1Q8VCQ6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sgms1Q8VCQ6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Sgms1Q8VCQ6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sgms1Q8VCQ6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sgms1Q8VCQ6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.28■■□□□ 1.8
Sgms1Q8VCQ6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.28■■□□□ 1.8
Sgms1Q8VCQ6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sgms1Q8VCQ6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sgms1Q8VCQ6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Sgms1Q8VCQ6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sgms1Q8VCQ6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sgms1Q8VCQ6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Sgms1Q8VCQ6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Sgms1Q8VCQ6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sgms1Q8VCQ6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Sgms1Q8VCQ6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Sgms1Q8VCQ6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sgms1Q8VCQ6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sgms1Q8VCQ6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sgms1Q8VCQ6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.21■■□□□ 1.79
Sgms1Q8VCQ6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sgms1Q8VCQ6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sgms1Q8VCQ6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.19■■□□□ 1.78
Sgms1Q8VCQ6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.19■■□□□ 1.78
Sgms1Q8VCQ6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.18■■□□□ 1.78
Sgms1Q8VCQ6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sgms1Q8VCQ6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Sgms1Q8VCQ6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sgms1Q8VCQ6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sgms1Q8VCQ6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Sgms1Q8VCQ6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.16■■□□□ 1.78
Sgms1Q8VCQ6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sgms1Q8VCQ6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sgms1Q8VCQ6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Sgms1Q8VCQ6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.14■■□□□ 1.77
Sgms1Q8VCQ6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sgms1Q8VCQ6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sgms1Q8VCQ6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Sgms1Q8VCQ6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Sgms1Q8VCQ6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sgms1Q8VCQ6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sgms1Q8VCQ6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Sgms1Q8VCQ6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sgms1Q8VCQ6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sgms1Q8VCQ6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
Sgms1Q8VCQ6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms