Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc3Q8R323 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rfc3Q8R323 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfc3Q8R323 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rfc3Q8R323 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rfc3Q8R323 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.3■■□□□ 1.16
Rfc3Q8R323 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rfc3Q8R323 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rfc3Q8R323 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfc3Q8R323 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfc3Q8R323 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rfc3Q8R323 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Rfc3Q8R323 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rfc3Q8R323 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.26■■□□□ 1.15
Rfc3Q8R323 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rfc3Q8R323 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Rfc3Q8R323 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rfc3Q8R323 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rfc3Q8R323 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.23■■□□□ 1.15
Rfc3Q8R323 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rfc3Q8R323 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rfc3Q8R323 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc3Q8R323 Nkain2-201ENSMUST00000092602 558 ntBASIC22.21■■□□□ 1.15
Rfc3Q8R323 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc3Q8R323 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc3Q8R323 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc3Q8R323 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc3Q8R323 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc3Q8R323 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc3Q8R323 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.2■■□□□ 1.14
Rfc3Q8R323 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.2■■□□□ 1.14
Rfc3Q8R323 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc3Q8R323 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.2■■□□□ 1.14
Rfc3Q8R323 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rfc3Q8R323 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc3Q8R323 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc3Q8R323 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc3Q8R323 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc3Q8R323 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.17■■□□□ 1.14
Rfc3Q8R323 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc3Q8R323 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc3Q8R323 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Rfc3Q8R323 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
Rfc3Q8R323 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rfc3Q8R323 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc3Q8R323 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc3Q8R323 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.14■■□□□ 1.13
Rfc3Q8R323 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc3Q8R323 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc3Q8R323 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rfc3Q8R323 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.12■■□□□ 1.13
Rfc3Q8R323 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rfc3Q8R323 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Rfc3Q8R323 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfc3Q8R323 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Rfc3Q8R323 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.11■■□□□ 1.13
Rfc3Q8R323 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc3Q8R323 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc3Q8R323 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc3Q8R323 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.1■■□□□ 1.13
Rfc3Q8R323 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.1■■□□□ 1.13
Rfc3Q8R323 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc3Q8R323 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
Rfc3Q8R323 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc3Q8R323 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rfc3Q8R323 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc3Q8R323 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Rfc3Q8R323 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc3Q8R323 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rfc3Q8R323 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rfc3Q8R323 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc3Q8R323 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Rfc3Q8R323 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc3Q8R323 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc3Q8R323 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc3Q8R323 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc3Q8R323 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc3Q8R323 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc3Q8R323 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc3Q8R323 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
Rfc3Q8R323 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rfc3Q8R323 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rfc3Q8R323 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rfc3Q8R323 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rfc3Q8R323 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rfc3Q8R323 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rfc3Q8R323 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.99■■□□□ 1.11
Rfc3Q8R323 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Rfc3Q8R323 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc3Q8R323 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc3Q8R323 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc3Q8R323 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.98■■□□□ 1.11
Rfc3Q8R323 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc3Q8R323 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc3Q8R323 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.97■■□□□ 1.11
Rfc3Q8R323 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.97■■□□□ 1.11
Rfc3Q8R323 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc3Q8R323 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc3Q8R323 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rfc3Q8R323 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms