Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
Ddx54Q8K4L0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ddx54Q8K4L0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Ddx54Q8K4L0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ddx54Q8K4L0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC33.14■■■□□ 2.9
Ddx54Q8K4L0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC33.13■■■□□ 2.89
Ddx54Q8K4L0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC33.13■■■□□ 2.89
Ddx54Q8K4L0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Ddx54Q8K4L0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC33.12■■■□□ 2.89
Ddx54Q8K4L0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Ddx54Q8K4L0 Gm30346-201ENSMUST00000218641 1699 ntBASIC33.11■■■□□ 2.89
Ddx54Q8K4L0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC33.11■■■□□ 2.89
Ddx54Q8K4L0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC33.1■■■□□ 2.89
Ddx54Q8K4L0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ddx54Q8K4L0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Ddx54Q8K4L0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ddx54Q8K4L0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC33.09■■■□□ 2.89
Ddx54Q8K4L0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
Ddx54Q8K4L0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC33.06■■■□□ 2.88
Ddx54Q8K4L0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ddx54Q8K4L0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ddx54Q8K4L0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC33.03■■■□□ 2.88
Ddx54Q8K4L0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC33■■■□□ 2.87
Ddx54Q8K4L0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ddx54Q8K4L0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ddx54Q8K4L0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ddx54Q8K4L0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Ddx54Q8K4L0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC32.94■■■□□ 2.86
Ddx54Q8K4L0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ddx54Q8K4L0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ddx54Q8K4L0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ddx54Q8K4L0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
Ddx54Q8K4L0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ddx54Q8K4L0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.85
Ddx54Q8K4L0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.88■■■□□ 2.85
Ddx54Q8K4L0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ddx54Q8K4L0 Gm15039-201ENSMUST00000118914 875 ntBASIC32.85■■■□□ 2.85
Ddx54Q8K4L0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ddx54Q8K4L0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ddx54Q8K4L0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx54Q8K4L0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx54Q8K4L0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx54Q8K4L0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Gm12366-201ENSMUST00000121722 873 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Gm5786-201ENSMUST00000085368 882 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Ddx54Q8K4L0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ddx54Q8K4L0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx54Q8K4L0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx54Q8K4L0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC32.74■■■□□ 2.83
Ddx54Q8K4L0 Scarna2-201ENSMUST00000157560 414 ntBASIC32.73■■■□□ 2.83
Ddx54Q8K4L0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Ddx54Q8K4L0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC32.73■■■□□ 2.83
Ddx54Q8K4L0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Ddx54Q8K4L0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC32.72■■■□□ 2.83
Ddx54Q8K4L0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Ddx54Q8K4L0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Ddx54Q8K4L0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Ddx54Q8K4L0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ddx54Q8K4L0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ddx54Q8K4L0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ddx54Q8K4L0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC32.66■■■□□ 2.82
Ddx54Q8K4L0 Gm11687-201ENSMUST00000118911 886 ntBASIC32.65■■■□□ 2.82
Ddx54Q8K4L0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ddx54Q8K4L0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ddx54Q8K4L0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC32.62■■■□□ 2.81
Ddx54Q8K4L0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms