Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Zc3h3Q8CHP0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.78■■□□□ 1.56
Zc3h3Q8CHP0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Zc3h3Q8CHP0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Zc3h3Q8CHP0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.76■■□□□ 1.55
Zc3h3Q8CHP0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Zc3h3Q8CHP0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Zc3h3Q8CHP0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Zc3h3Q8CHP0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Zc3h3Q8CHP0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Zc3h3Q8CHP0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.75■■□□□ 1.55
Zc3h3Q8CHP0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Zc3h3Q8CHP0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.74■■□□□ 1.55
Zc3h3Q8CHP0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3h3Q8CHP0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.73■■□□□ 1.55
Zc3h3Q8CHP0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Zc3h3Q8CHP0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Zc3h3Q8CHP0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Zc3h3Q8CHP0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Zc3h3Q8CHP0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Zc3h3Q8CHP0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Zc3h3Q8CHP0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Zc3h3Q8CHP0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Zc3h3Q8CHP0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.7■■□□□ 1.54
Zc3h3Q8CHP0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Zc3h3Q8CHP0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.68■■□□□ 1.54
Zc3h3Q8CHP0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Zc3h3Q8CHP0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Zc3h3Q8CHP0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Zc3h3Q8CHP0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.66■■□□□ 1.54
Zc3h3Q8CHP0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Zc3h3Q8CHP0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Zc3h3Q8CHP0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Zc3h3Q8CHP0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Zc3h3Q8CHP0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Zc3h3Q8CHP0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.63■■□□□ 1.53
Zc3h3Q8CHP0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zc3h3Q8CHP0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Zc3h3Q8CHP0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Zc3h3Q8CHP0 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.61■■□□□ 1.53
Zc3h3Q8CHP0 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.6■■□□□ 1.53
Zc3h3Q8CHP0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Zc3h3Q8CHP0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Zc3h3Q8CHP0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.58■■□□□ 1.53
Zc3h3Q8CHP0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.58■■□□□ 1.53
Zc3h3Q8CHP0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.57■■□□□ 1.52
Zc3h3Q8CHP0 Gm12366-201ENSMUST00000121722 873 ntBASIC24.57■■□□□ 1.52
Zc3h3Q8CHP0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.57■■□□□ 1.52
Zc3h3Q8CHP0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Zc3h3Q8CHP0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.57■■□□□ 1.52
Zc3h3Q8CHP0 Gm5786-201ENSMUST00000085368 882 ntBASIC24.57■■□□□ 1.52
Zc3h3Q8CHP0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Zc3h3Q8CHP0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Zc3h3Q8CHP0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.55■■□□□ 1.52
Zc3h3Q8CHP0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.55■■□□□ 1.52
Zc3h3Q8CHP0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Zc3h3Q8CHP0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.54■■□□□ 1.52
Zc3h3Q8CHP0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Zc3h3Q8CHP0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Zc3h3Q8CHP0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Zc3h3Q8CHP0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Zc3h3Q8CHP0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Zc3h3Q8CHP0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Zc3h3Q8CHP0 Scarna2-201ENSMUST00000157560 414 ntBASIC24.5■■□□□ 1.51
Zc3h3Q8CHP0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Zc3h3Q8CHP0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Zc3h3Q8CHP0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Zc3h3Q8CHP0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.47■■□□□ 1.51
Zc3h3Q8CHP0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Zc3h3Q8CHP0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Zc3h3Q8CHP0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Zc3h3Q8CHP0 Gm11687-201ENSMUST00000118911 886 ntBASIC24.46■■□□□ 1.51
Zc3h3Q8CHP0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.46■■□□□ 1.51
Zc3h3Q8CHP0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Zc3h3Q8CHP0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Zc3h3Q8CHP0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.44■■□□□ 1.5
Zc3h3Q8CHP0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zc3h3Q8CHP0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Zc3h3Q8CHP0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zc3h3Q8CHP0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zc3h3Q8CHP0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zc3h3Q8CHP0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Zc3h3Q8CHP0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h3Q8CHP0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h3Q8CHP0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h3Q8CHP0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h3Q8CHP0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Zc3h3Q8CHP0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Zc3h3Q8CHP0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zc3h3Q8CHP0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Zc3h3Q8CHP0 Gm9806-201ENSMUST00000051080 552 ntBASIC24.4■■□□□ 1.5
Zc3h3Q8CHP0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Zc3h3Q8CHP0 Gm4799-201ENSMUST00000095396 657 ntBASIC24.4■■□□□ 1.5
Zc3h3Q8CHP0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Zc3h3Q8CHP0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Zc3h3Q8CHP0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zc3h3Q8CHP0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zc3h3Q8CHP0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zc3h3Q8CHP0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Zc3h3Q8CHP0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 769.2 ms