Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cc2d1bQ8BRN9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cc2d1bQ8BRN9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.8■■□□□ 1.88
Cc2d1bQ8BRN9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cc2d1bQ8BRN9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Cc2d1bQ8BRN9 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.79■■□□□ 1.88
Cc2d1bQ8BRN9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cc2d1bQ8BRN9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.79■■□□□ 1.88
Cc2d1bQ8BRN9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cc2d1bQ8BRN9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cc2d1bQ8BRN9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cc2d1bQ8BRN9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cc2d1bQ8BRN9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cc2d1bQ8BRN9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.73■■□□□ 1.87
Cc2d1bQ8BRN9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cc2d1bQ8BRN9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cc2d1bQ8BRN9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cc2d1bQ8BRN9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.71■■□□□ 1.87
Cc2d1bQ8BRN9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cc2d1bQ8BRN9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cc2d1bQ8BRN9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cc2d1bQ8BRN9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cc2d1bQ8BRN9 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.7■■□□□ 1.86
Cc2d1bQ8BRN9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cc2d1bQ8BRN9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cc2d1bQ8BRN9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cc2d1bQ8BRN9 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.69■■□□□ 1.86
Cc2d1bQ8BRN9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cc2d1bQ8BRN9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cc2d1bQ8BRN9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.68■■□□□ 1.86
Cc2d1bQ8BRN9 Gm9397-201ENSMUST00000200125 605 ntBASIC26.68■■□□□ 1.86
Cc2d1bQ8BRN9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cc2d1bQ8BRN9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cc2d1bQ8BRN9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cc2d1bQ8BRN9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.67■■□□□ 1.86
Cc2d1bQ8BRN9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.67■■□□□ 1.86
Cc2d1bQ8BRN9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Cc2d1bQ8BRN9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cc2d1bQ8BRN9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.65■■□□□ 1.86
Cc2d1bQ8BRN9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cc2d1bQ8BRN9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cc2d1bQ8BRN9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
Cc2d1bQ8BRN9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cc2d1bQ8BRN9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cc2d1bQ8BRN9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
Cc2d1bQ8BRN9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cc2d1bQ8BRN9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cc2d1bQ8BRN9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cc2d1bQ8BRN9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.61■■□□□ 1.85
Cc2d1bQ8BRN9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cc2d1bQ8BRN9 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.59■■□□□ 1.85
Cc2d1bQ8BRN9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cc2d1bQ8BRN9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.59■■□□□ 1.85
Cc2d1bQ8BRN9 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.59■■□□□ 1.85
Cc2d1bQ8BRN9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Cc2d1bQ8BRN9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cc2d1bQ8BRN9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cc2d1bQ8BRN9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cc2d1bQ8BRN9 Gm24970-201ENSMUST00000175582 82 ntBASIC26.56■■□□□ 1.84
Cc2d1bQ8BRN9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cc2d1bQ8BRN9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cc2d1bQ8BRN9 Gm45855-201ENSMUST00000212546 880 ntBASIC26.54■■□□□ 1.84
Cc2d1bQ8BRN9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cc2d1bQ8BRN9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cc2d1bQ8BRN9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cc2d1bQ8BRN9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cc2d1bQ8BRN9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Cc2d1bQ8BRN9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.52■■□□□ 1.84
Cc2d1bQ8BRN9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cc2d1bQ8BRN9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cc2d1bQ8BRN9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cc2d1bQ8BRN9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.47■■□□□ 1.83
Cc2d1bQ8BRN9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cc2d1bQ8BRN9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cc2d1bQ8BRN9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cc2d1bQ8BRN9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cc2d1bQ8BRN9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.42■■□□□ 1.82
Cc2d1bQ8BRN9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cc2d1bQ8BRN9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cc2d1bQ8BRN9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.41■■□□□ 1.82
Cc2d1bQ8BRN9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cc2d1bQ8BRN9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cc2d1bQ8BRN9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cc2d1bQ8BRN9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.37■■□□□ 1.81
Cc2d1bQ8BRN9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cc2d1bQ8BRN9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cc2d1bQ8BRN9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cc2d1bQ8BRN9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cc2d1bQ8BRN9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
Cc2d1bQ8BRN9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cc2d1bQ8BRN9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cc2d1bQ8BRN9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cc2d1bQ8BRN9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cc2d1bQ8BRN9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.33■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms