Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Tdp1Q8BJ37 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.5■■□□□ 1.99
Tdp1Q8BJ37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Tdp1Q8BJ37 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Tdp1Q8BJ37 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.49■■□□□ 1.99
Tdp1Q8BJ37 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Tdp1Q8BJ37 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Tdp1Q8BJ37 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.48■■□□□ 1.99
Tdp1Q8BJ37 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Tdp1Q8BJ37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Tdp1Q8BJ37 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Tdp1Q8BJ37 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
Tdp1Q8BJ37 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Tdp1Q8BJ37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Tdp1Q8BJ37 Gm11599-201ENSMUST00000118720 878 ntBASIC27.44■■□□□ 1.98
Tdp1Q8BJ37 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Tdp1Q8BJ37 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.43■■□□□ 1.98
Tdp1Q8BJ37 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tdp1Q8BJ37 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Tdp1Q8BJ37 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.42■■□□□ 1.98
Tdp1Q8BJ37 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
Tdp1Q8BJ37 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tdp1Q8BJ37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Tdp1Q8BJ37 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tdp1Q8BJ37 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Tdp1Q8BJ37 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tdp1Q8BJ37 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.4■■□□□ 1.98
Tdp1Q8BJ37 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tdp1Q8BJ37 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Tdp1Q8BJ37 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Tdp1Q8BJ37 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.38■■□□□ 1.97
Tdp1Q8BJ37 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Tdp1Q8BJ37 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.37■■□□□ 1.97
Tdp1Q8BJ37 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.35■■□□□ 1.97
Tdp1Q8BJ37 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Tdp1Q8BJ37 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tdp1Q8BJ37 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.34■■□□□ 1.97
Tdp1Q8BJ37 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Tdp1Q8BJ37 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Tdp1Q8BJ37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Tdp1Q8BJ37 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Tdp1Q8BJ37 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.32■■□□□ 1.96
Tdp1Q8BJ37 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Tdp1Q8BJ37 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Tdp1Q8BJ37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Tdp1Q8BJ37 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Tdp1Q8BJ37 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.28■■□□□ 1.96
Tdp1Q8BJ37 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Tdp1Q8BJ37 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Tdp1Q8BJ37 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.27■■□□□ 1.96
Tdp1Q8BJ37 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Tdp1Q8BJ37 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Tdp1Q8BJ37 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Tdp1Q8BJ37 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Tdp1Q8BJ37 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.23■■□□□ 1.95
Tdp1Q8BJ37 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Tdp1Q8BJ37 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Tdp1Q8BJ37 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.22■■□□□ 1.95
Tdp1Q8BJ37 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Tdp1Q8BJ37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Tdp1Q8BJ37 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Tdp1Q8BJ37 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Tdp1Q8BJ37 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.17■■□□□ 1.94
Tdp1Q8BJ37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Tdp1Q8BJ37 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Tdp1Q8BJ37 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Tdp1Q8BJ37 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tdp1Q8BJ37 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tdp1Q8BJ37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.16■■□□□ 1.94
Tdp1Q8BJ37 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tdp1Q8BJ37 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tdp1Q8BJ37 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Tdp1Q8BJ37 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tdp1Q8BJ37 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Tdp1Q8BJ37 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Tdp1Q8BJ37 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Tdp1Q8BJ37 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.14■■□□□ 1.94
Tdp1Q8BJ37 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Tdp1Q8BJ37 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Tdp1Q8BJ37 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Tdp1Q8BJ37 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Tdp1Q8BJ37 Gm30023-201ENSMUST00000197970 889 ntBASIC27.12■■□□□ 1.93
Tdp1Q8BJ37 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.11■■□□□ 1.93
Tdp1Q8BJ37 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.11■■□□□ 1.93
Tdp1Q8BJ37 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Tdp1Q8BJ37 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.08■■□□□ 1.93
Tdp1Q8BJ37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Tdp1Q8BJ37 Gm11175-201ENSMUST00000116172 543 ntBASIC27.08■■□□□ 1.93
Tdp1Q8BJ37 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Tdp1Q8BJ37 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.07■■□□□ 1.92
Tdp1Q8BJ37 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Tdp1Q8BJ37 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Tdp1Q8BJ37 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Tdp1Q8BJ37 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Tdp1Q8BJ37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Tdp1Q8BJ37 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Tdp1Q8BJ37 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Tdp1Q8BJ37 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.03■■□□□ 1.92
Tdp1Q8BJ37 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Tdp1Q8BJ37 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms