Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vrk1Q80X41 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Vrk1Q80X41 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Vrk1Q80X41 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Vrk1Q80X41 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vrk1Q80X41 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vrk1Q80X41 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Vrk1Q80X41 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Vrk1Q80X41 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Vrk1Q80X41 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Vrk1Q80X41 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Vrk1Q80X41 Gm11599-201ENSMUST00000118720 878 ntBASIC23.3■■□□□ 1.32
Vrk1Q80X41 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.3■■□□□ 1.32
Vrk1Q80X41 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
Vrk1Q80X41 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Vrk1Q80X41 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vrk1Q80X41 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.28■■□□□ 1.32
Vrk1Q80X41 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vrk1Q80X41 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Vrk1Q80X41 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vrk1Q80X41 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vrk1Q80X41 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.26■■□□□ 1.31
Vrk1Q80X41 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.26■■□□□ 1.31
Vrk1Q80X41 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.25■■□□□ 1.31
Vrk1Q80X41 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.24■■□□□ 1.31
Vrk1Q80X41 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vrk1Q80X41 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vrk1Q80X41 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Vrk1Q80X41 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Vrk1Q80X41 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Vrk1Q80X41 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Vrk1Q80X41 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Vrk1Q80X41 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.22■■□□□ 1.31
Vrk1Q80X41 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.22■■□□□ 1.31
Vrk1Q80X41 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vrk1Q80X41 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Vrk1Q80X41 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
Vrk1Q80X41 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vrk1Q80X41 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.19■■□□□ 1.3
Vrk1Q80X41 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vrk1Q80X41 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Vrk1Q80X41 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vrk1Q80X41 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vrk1Q80X41 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
Vrk1Q80X41 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.16■■□□□ 1.3
Vrk1Q80X41 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vrk1Q80X41 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vrk1Q80X41 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Vrk1Q80X41 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Vrk1Q80X41 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vrk1Q80X41 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vrk1Q80X41 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vrk1Q80X41 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.14■■□□□ 1.29
Vrk1Q80X41 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Vrk1Q80X41 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vrk1Q80X41 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.13■■□□□ 1.29
Vrk1Q80X41 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vrk1Q80X41 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vrk1Q80X41 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vrk1Q80X41 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.11■■□□□ 1.29
Vrk1Q80X41 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Vrk1Q80X41 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.1■■□□□ 1.29
Vrk1Q80X41 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.1■■□□□ 1.29
Vrk1Q80X41 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Vrk1Q80X41 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vrk1Q80X41 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.09■■□□□ 1.29
Vrk1Q80X41 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.08■■□□□ 1.29
Vrk1Q80X41 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Vrk1Q80X41 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Vrk1Q80X41 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vrk1Q80X41 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Vrk1Q80X41 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Vrk1Q80X41 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Vrk1Q80X41 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Vrk1Q80X41 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.04■■□□□ 1.28
Vrk1Q80X41 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vrk1Q80X41 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Vrk1Q80X41 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Vrk1Q80X41 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.04■■□□□ 1.28
Vrk1Q80X41 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vrk1Q80X41 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Vrk1Q80X41 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.02■■□□□ 1.28
Vrk1Q80X41 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vrk1Q80X41 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vrk1Q80X41 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.01■■□□□ 1.27
Vrk1Q80X41 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vrk1Q80X41 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vrk1Q80X41 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vrk1Q80X41 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vrk1Q80X41 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vrk1Q80X41 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vrk1Q80X41 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Vrk1Q80X41 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vrk1Q80X41 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vrk1Q80X41 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vrk1Q80X41 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vrk1Q80X41 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vrk1Q80X41 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.95■■□□□ 1.26
Vrk1Q80X41 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vrk1Q80X41 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms