Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13bQ80TY5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps13bQ80TY5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vps13bQ80TY5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13bQ80TY5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13bQ80TY5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13bQ80TY5 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.22■□□□□ 0.03
Vps13bQ80TY5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13bQ80TY5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.21■□□□□ 0.03
Vps13bQ80TY5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13bQ80TY5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Vps13bQ80TY5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13bQ80TY5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13bQ80TY5 Gm6311-201ENSMUST00000073790 878 ntBASIC15.19■□□□□ 0.02
Vps13bQ80TY5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps13bQ80TY5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps13bQ80TY5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13bQ80TY5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13bQ80TY5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13bQ80TY5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13bQ80TY5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps13bQ80TY5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13bQ80TY5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.16■□□□□ 0.02
Vps13bQ80TY5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps13bQ80TY5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps13bQ80TY5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vps13bQ80TY5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps13bQ80TY5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps13bQ80TY5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps13bQ80TY5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps13bQ80TY5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps13bQ80TY5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.14■□□□□ 0.01
Vps13bQ80TY5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13bQ80TY5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.12■□□□□ 0.01
Vps13bQ80TY5 Gm4799-201ENSMUST00000095396 657 ntBASIC15.12■□□□□ 0.01
Vps13bQ80TY5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13bQ80TY5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13bQ80TY5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13bQ80TY5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13bQ80TY5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13bQ80TY5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13bQ80TY5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13bQ80TY5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13bQ80TY5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vps13bQ80TY5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13bQ80TY5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps13bQ80TY5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vps13bQ80TY5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13bQ80TY5 Gm15039-201ENSMUST00000118914 875 ntBASIC15.07■□□□□ 0
Vps13bQ80TY5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13bQ80TY5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps13bQ80TY5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.07■□□□□ 0
Vps13bQ80TY5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13bQ80TY5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13bQ80TY5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13bQ80TY5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13bQ80TY5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13bQ80TY5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.05■□□□□ -0
Vps13bQ80TY5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13bQ80TY5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps13bQ80TY5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.04■□□□□ -0
Vps13bQ80TY5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13bQ80TY5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13bQ80TY5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.03■□□□□ -0
Vps13bQ80TY5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps13bQ80TY5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13bQ80TY5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13bQ80TY5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.02■□□□□ -0
Vps13bQ80TY5 Gm12366-201ENSMUST00000121722 873 ntBASIC15.02■□□□□ -0
Vps13bQ80TY5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.02■□□□□ -0
Vps13bQ80TY5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13bQ80TY5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.02■□□□□ -0
Vps13bQ80TY5 Gm5786-201ENSMUST00000085368 882 ntBASIC15.02■□□□□ -0
Vps13bQ80TY5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vps13bQ80TY5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13bQ80TY5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13bQ80TY5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13bQ80TY5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13bQ80TY5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps13bQ80TY5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps13bQ80TY5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15□□□□□ -0.01
Vps13bQ80TY5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps13bQ80TY5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps13bQ80TY5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.99□□□□□ -0.01
Vps13bQ80TY5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps13bQ80TY5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps13bQ80TY5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms