Protein–RNA interactions for Protein: Q7TMX5

Shq1, Protein SHQ1 homolog, mousemouse

Predictions only

Length 569 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shq1Q7TMX5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shq1Q7TMX5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Shq1Q7TMX5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Shq1Q7TMX5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Shq1Q7TMX5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Shq1Q7TMX5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
Shq1Q7TMX5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC34.64■■■■□ 3.14
Shq1Q7TMX5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Shq1Q7TMX5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC34.63■■■■□ 3.13
Shq1Q7TMX5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC34.61■■■■□ 3.13
Shq1Q7TMX5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC34.59■■■■□ 3.13
Shq1Q7TMX5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Shq1Q7TMX5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
Shq1Q7TMX5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Shq1Q7TMX5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Shq1Q7TMX5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Shq1Q7TMX5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Shq1Q7TMX5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC34.53■■■■□ 3.12
Shq1Q7TMX5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
Shq1Q7TMX5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Shq1Q7TMX5 Gm11175-201ENSMUST00000116172 543 ntBASIC34.53■■■■□ 3.12
Shq1Q7TMX5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Shq1Q7TMX5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC34.52■■■■□ 3.12
Shq1Q7TMX5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Shq1Q7TMX5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC34.51■■■■□ 3.12
Shq1Q7TMX5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Shq1Q7TMX5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Shq1Q7TMX5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Shq1Q7TMX5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC34.49■■■■□ 3.11
Shq1Q7TMX5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC34.49■■■■□ 3.11
Shq1Q7TMX5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Shq1Q7TMX5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Shq1Q7TMX5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Shq1Q7TMX5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Shq1Q7TMX5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC34.45■■■■□ 3.11
Shq1Q7TMX5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
Shq1Q7TMX5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Shq1Q7TMX5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC34.44■■■■□ 3.1
Shq1Q7TMX5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC34.44■■■■□ 3.1
Shq1Q7TMX5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Shq1Q7TMX5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Shq1Q7TMX5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
Shq1Q7TMX5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
Shq1Q7TMX5 Mir6538-201ENSMUST00000183713 110 ntBASIC34.4■■■■□ 3.1
Shq1Q7TMX5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Shq1Q7TMX5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Shq1Q7TMX5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
Shq1Q7TMX5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC34.36■■■■□ 3.09
Shq1Q7TMX5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Shq1Q7TMX5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.09
Shq1Q7TMX5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC34.34■■■■□ 3.09
Shq1Q7TMX5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Shq1Q7TMX5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shq1Q7TMX5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shq1Q7TMX5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shq1Q7TMX5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Shq1Q7TMX5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
Shq1Q7TMX5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC34.3■■■■□ 3.08
Shq1Q7TMX5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Shq1Q7TMX5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Shq1Q7TMX5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Shq1Q7TMX5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Shq1Q7TMX5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC34.28■■■■□ 3.08
Shq1Q7TMX5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Shq1Q7TMX5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Shq1Q7TMX5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Shq1Q7TMX5 Gm6345-201ENSMUST00000180378 1691 ntBASIC34.25■■■■□ 3.07
Shq1Q7TMX5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Shq1Q7TMX5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Shq1Q7TMX5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Shq1Q7TMX5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Shq1Q7TMX5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC34.21■■■■□ 3.07
Shq1Q7TMX5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Shq1Q7TMX5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Shq1Q7TMX5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC34.2■■■■□ 3.07
Shq1Q7TMX5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
Shq1Q7TMX5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC34.19■■■■□ 3.06
Shq1Q7TMX5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Shq1Q7TMX5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC34.17■■■■□ 3.06
Shq1Q7TMX5 Cap2-205ENSMUST00000225824 1634 ntBASIC34.17■■■■□ 3.06
Shq1Q7TMX5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Shq1Q7TMX5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC34.16■■■■□ 3.06
Shq1Q7TMX5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC34.15■■■■□ 3.06
Shq1Q7TMX5 Gm30023-201ENSMUST00000197970 889 ntBASIC34.15■■■■□ 3.06
Shq1Q7TMX5 Gm6311-201ENSMUST00000073790 878 ntBASIC34.14■■■■□ 3.06
Shq1Q7TMX5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC34.13■■■■□ 3.05
Shq1Q7TMX5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC34.12■■■■□ 3.05
Shq1Q7TMX5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Shq1Q7TMX5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
Shq1Q7TMX5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC34.11■■■■□ 3.05
Shq1Q7TMX5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC34.1■■■■□ 3.05
Shq1Q7TMX5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
Shq1Q7TMX5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.09■■■■□ 3.05
Shq1Q7TMX5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Shq1Q7TMX5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
Shq1Q7TMX5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Shq1Q7TMX5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC34.05■■■■□ 3.04
Shq1Q7TMX5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Shq1Q7TMX5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Shq1Q7TMX5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC34.04■■■■□ 3.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms