Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rnf220Q6PDX6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.74■■□□□ 1.23
Rnf220Q6PDX6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf220Q6PDX6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf220Q6PDX6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Rnf220Q6PDX6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf220Q6PDX6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Rnf220Q6PDX6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf220Q6PDX6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf220Q6PDX6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf220Q6PDX6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Rnf220Q6PDX6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Rnf220Q6PDX6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf220Q6PDX6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf220Q6PDX6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf220Q6PDX6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf220Q6PDX6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf220Q6PDX6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rnf220Q6PDX6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf220Q6PDX6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf220Q6PDX6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf220Q6PDX6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf220Q6PDX6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rnf220Q6PDX6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf220Q6PDX6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf220Q6PDX6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf220Q6PDX6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.66■■□□□ 1.22
Rnf220Q6PDX6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf220Q6PDX6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf220Q6PDX6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf220Q6PDX6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rnf220Q6PDX6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf220Q6PDX6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rnf220Q6PDX6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
Rnf220Q6PDX6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf220Q6PDX6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Rnf220Q6PDX6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Rnf220Q6PDX6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf220Q6PDX6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf220Q6PDX6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf220Q6PDX6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf220Q6PDX6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf220Q6PDX6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf220Q6PDX6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf220Q6PDX6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf220Q6PDX6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf220Q6PDX6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.6■■□□□ 1.21
Rnf220Q6PDX6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rnf220Q6PDX6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf220Q6PDX6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf220Q6PDX6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf220Q6PDX6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf220Q6PDX6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
Rnf220Q6PDX6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Rnf220Q6PDX6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf220Q6PDX6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Rnf220Q6PDX6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rnf220Q6PDX6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Rnf220Q6PDX6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf220Q6PDX6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf220Q6PDX6 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.57■■□□□ 1.2
Rnf220Q6PDX6 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.57■■□□□ 1.2
Rnf220Q6PDX6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.57■■□□□ 1.2
Rnf220Q6PDX6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf220Q6PDX6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf220Q6PDX6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf220Q6PDX6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf220Q6PDX6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf220Q6PDX6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf220Q6PDX6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf220Q6PDX6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf220Q6PDX6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf220Q6PDX6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf220Q6PDX6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf220Q6PDX6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf220Q6PDX6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf220Q6PDX6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Rnf220Q6PDX6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf220Q6PDX6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf220Q6PDX6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Rnf220Q6PDX6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf220Q6PDX6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf220Q6PDX6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf220Q6PDX6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.46■■□□□ 1.19
Rnf220Q6PDX6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf220Q6PDX6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rnf220Q6PDX6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf220Q6PDX6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf220Q6PDX6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf220Q6PDX6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf220Q6PDX6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf220Q6PDX6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf220Q6PDX6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf220Q6PDX6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms