Protein–RNA interactions for Protein: Q6P9K8

Caskin1, Caskin-1, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Caskin1Q6P9K8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Caskin1Q6P9K8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Caskin1Q6P9K8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
Caskin1Q6P9K8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Caskin1Q6P9K8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Caskin1Q6P9K8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC37.17■■■■□ 3.54
Caskin1Q6P9K8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC37.17■■■■□ 3.54
Caskin1Q6P9K8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC37.16■■■■□ 3.54
Caskin1Q6P9K8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC37.16■■■■□ 3.54
Caskin1Q6P9K8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC37.14■■■■□ 3.54
Caskin1Q6P9K8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
Caskin1Q6P9K8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Caskin1Q6P9K8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Caskin1Q6P9K8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC37.12■■■■□ 3.53
Caskin1Q6P9K8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC37.11■■■■□ 3.53
Caskin1Q6P9K8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Caskin1Q6P9K8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Caskin1Q6P9K8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC37.07■■■■□ 3.52
Caskin1Q6P9K8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC37.07■■■■□ 3.52
Caskin1Q6P9K8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Caskin1Q6P9K8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Caskin1Q6P9K8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Caskin1Q6P9K8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Caskin1Q6P9K8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC37.02■■■■□ 3.52
Caskin1Q6P9K8 Gm6345-201ENSMUST00000180378 1691 ntBASIC37.02■■■■□ 3.52
Caskin1Q6P9K8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Caskin1Q6P9K8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC37.01■■■■□ 3.51
Caskin1Q6P9K8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC37■■■■□ 3.51
Caskin1Q6P9K8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC37■■■■□ 3.51
Caskin1Q6P9K8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC37■■■■□ 3.51
Caskin1Q6P9K8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Caskin1Q6P9K8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Caskin1Q6P9K8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC36.98■■■■□ 3.51
Caskin1Q6P9K8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Caskin1Q6P9K8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Caskin1Q6P9K8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC36.97■■■■□ 3.51
Caskin1Q6P9K8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC36.97■■■■□ 3.51
Caskin1Q6P9K8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Caskin1Q6P9K8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Caskin1Q6P9K8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Caskin1Q6P9K8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC36.93■■■■□ 3.5
Caskin1Q6P9K8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Caskin1Q6P9K8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC36.93■■■■□ 3.5
Caskin1Q6P9K8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC36.92■■■■□ 3.5
Caskin1Q6P9K8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC36.92■■■■□ 3.5
Caskin1Q6P9K8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
Caskin1Q6P9K8 Gm11175-201ENSMUST00000116172 543 ntBASIC36.9■■■■□ 3.5
Caskin1Q6P9K8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC36.89■■■■□ 3.5
Caskin1Q6P9K8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
Caskin1Q6P9K8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
Caskin1Q6P9K8 Mir6538-201ENSMUST00000183713 110 ntBASIC36.87■■■■□ 3.49
Caskin1Q6P9K8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Caskin1Q6P9K8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC36.85■■■■□ 3.49
Caskin1Q6P9K8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Caskin1Q6P9K8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Caskin1Q6P9K8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Caskin1Q6P9K8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC36.83■■■■□ 3.49
Caskin1Q6P9K8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
Caskin1Q6P9K8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Caskin1Q6P9K8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC36.82■■■■□ 3.48
Caskin1Q6P9K8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC36.79■■■■□ 3.48
Caskin1Q6P9K8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
Caskin1Q6P9K8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC36.78■■■■□ 3.48
Caskin1Q6P9K8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
Caskin1Q6P9K8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Caskin1Q6P9K8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC36.76■■■■□ 3.48
Caskin1Q6P9K8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
Caskin1Q6P9K8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC36.76■■■■□ 3.47
Caskin1Q6P9K8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC36.75■■■■□ 3.47
Caskin1Q6P9K8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Caskin1Q6P9K8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
Caskin1Q6P9K8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
Caskin1Q6P9K8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC36.71■■■■□ 3.47
Caskin1Q6P9K8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC36.71■■■■□ 3.47
Caskin1Q6P9K8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC36.7■■■■□ 3.47
Caskin1Q6P9K8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
Caskin1Q6P9K8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Caskin1Q6P9K8 Gm30023-201ENSMUST00000197970 889 ntBASIC36.69■■■■□ 3.46
Caskin1Q6P9K8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
Caskin1Q6P9K8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Caskin1Q6P9K8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
Caskin1Q6P9K8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Caskin1Q6P9K8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Caskin1Q6P9K8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
Caskin1Q6P9K8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
Caskin1Q6P9K8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Caskin1Q6P9K8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC36.62■■■■□ 3.45
Caskin1Q6P9K8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Caskin1Q6P9K8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
Caskin1Q6P9K8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
Caskin1Q6P9K8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC36.59■■■■□ 3.45
Caskin1Q6P9K8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC36.58■■■■□ 3.45
Caskin1Q6P9K8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC36.58■■■■□ 3.45
Caskin1Q6P9K8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC36.58■■■■□ 3.45
Caskin1Q6P9K8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
Caskin1Q6P9K8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Caskin1Q6P9K8 Particl-201ENSMUST00000205370 1560 ntBASIC36.54■■■■□ 3.44
Caskin1Q6P9K8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC36.53■■■■□ 3.44
Caskin1Q6P9K8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Caskin1Q6P9K8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms