Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
U2surpQ6NV83 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
U2surpQ6NV83 Gm6821-201ENSMUST00000107540 542 ntBASIC31.53■■■□□ 2.64
U2surpQ6NV83 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.53■■■□□ 2.64
U2surpQ6NV83 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
U2surpQ6NV83 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.52■■■□□ 2.64
U2surpQ6NV83 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
U2surpQ6NV83 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
U2surpQ6NV83 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.51■■■□□ 2.63
U2surpQ6NV83 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
U2surpQ6NV83 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.49■■■□□ 2.63
U2surpQ6NV83 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.49■■■□□ 2.63
U2surpQ6NV83 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
U2surpQ6NV83 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
U2surpQ6NV83 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
U2surpQ6NV83 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2surpQ6NV83 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2surpQ6NV83 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2surpQ6NV83 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
U2surpQ6NV83 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
U2surpQ6NV83 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.46■■■□□ 2.63
U2surpQ6NV83 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.45■■■□□ 2.62
U2surpQ6NV83 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
U2surpQ6NV83 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
U2surpQ6NV83 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
U2surpQ6NV83 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
U2surpQ6NV83 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
U2surpQ6NV83 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
U2surpQ6NV83 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
U2surpQ6NV83 Gm8503-201ENSMUST00000118131 455 ntBASIC31.4■■■□□ 2.62
U2surpQ6NV83 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.39■■■□□ 2.62
U2surpQ6NV83 Nkain2-201ENSMUST00000092602 558 ntBASIC31.39■■■□□ 2.62
U2surpQ6NV83 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.38■■■□□ 2.61
U2surpQ6NV83 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
U2surpQ6NV83 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
U2surpQ6NV83 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
U2surpQ6NV83 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
U2surpQ6NV83 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
U2surpQ6NV83 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
U2surpQ6NV83 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
U2surpQ6NV83 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
U2surpQ6NV83 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
U2surpQ6NV83 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.34■■■□□ 2.61
U2surpQ6NV83 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
U2surpQ6NV83 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
U2surpQ6NV83 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
U2surpQ6NV83 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
U2surpQ6NV83 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
U2surpQ6NV83 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
U2surpQ6NV83 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
U2surpQ6NV83 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
U2surpQ6NV83 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
U2surpQ6NV83 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
U2surpQ6NV83 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
U2surpQ6NV83 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
U2surpQ6NV83 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
U2surpQ6NV83 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
U2surpQ6NV83 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
U2surpQ6NV83 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
U2surpQ6NV83 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
U2surpQ6NV83 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
U2surpQ6NV83 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
U2surpQ6NV83 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
U2surpQ6NV83 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
U2surpQ6NV83 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
U2surpQ6NV83 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
U2surpQ6NV83 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
U2surpQ6NV83 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
U2surpQ6NV83 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
U2surpQ6NV83 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.23■■■□□ 2.59
U2surpQ6NV83 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
U2surpQ6NV83 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.21■■■□□ 2.59
U2surpQ6NV83 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.21■■■□□ 2.59
U2surpQ6NV83 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
U2surpQ6NV83 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.2■■■□□ 2.59
U2surpQ6NV83 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
U2surpQ6NV83 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
U2surpQ6NV83 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
U2surpQ6NV83 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.19■■■□□ 2.58
U2surpQ6NV83 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
U2surpQ6NV83 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.18■■■□□ 2.58
U2surpQ6NV83 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.18■■■□□ 2.58
U2surpQ6NV83 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.18■■■□□ 2.58
U2surpQ6NV83 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
U2surpQ6NV83 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
U2surpQ6NV83 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.16■■■□□ 2.58
U2surpQ6NV83 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
U2surpQ6NV83 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
U2surpQ6NV83 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
U2surpQ6NV83 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
U2surpQ6NV83 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.11■■■□□ 2.57
U2surpQ6NV83 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.1■■■□□ 2.57
U2surpQ6NV83 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
U2surpQ6NV83 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.07■■■□□ 2.56
U2surpQ6NV83 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.07■■■□□ 2.56
U2surpQ6NV83 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
U2surpQ6NV83 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
U2surpQ6NV83 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
U2surpQ6NV83 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
U2surpQ6NV83 Amer2-203ENSMUST00000225247 2662 ntBASIC31.05■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms