Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Frem1Q684R7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Frem1Q684R7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Frem1Q684R7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Frem1Q684R7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Frem1Q684R7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Frem1Q684R7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Frem1Q684R7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Frem1Q684R7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Frem1Q684R7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Frem1Q684R7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Frem1Q684R7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Frem1Q684R7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Frem1Q684R7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Frem1Q684R7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Frem1Q684R7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Frem1Q684R7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Frem1Q684R7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Frem1Q684R7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Frem1Q684R7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.44■■□□□ 1.02
Frem1Q684R7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Frem1Q684R7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.44■■□□□ 1.02
Frem1Q684R7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Frem1Q684R7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Frem1Q684R7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.42■■□□□ 1.02
Frem1Q684R7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.42■■□□□ 1.02
Frem1Q684R7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Frem1Q684R7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Frem1Q684R7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Frem1Q684R7 Gm11599-201ENSMUST00000118720 878 ntBASIC21.41■■□□□ 1.02
Frem1Q684R7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Frem1Q684R7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Frem1Q684R7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Frem1Q684R7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Frem1Q684R7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Frem1Q684R7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Frem1Q684R7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Frem1Q684R7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.37■■□□□ 1.01
Frem1Q684R7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Frem1Q684R7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.36■■□□□ 1.01
Frem1Q684R7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Frem1Q684R7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.36■■□□□ 1.01
Frem1Q684R7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.34■■□□□ 1.01
Frem1Q684R7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Frem1Q684R7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Frem1Q684R7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.32■■□□□ 1
Frem1Q684R7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frem1Q684R7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Frem1Q684R7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Frem1Q684R7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.31■■□□□ 1
Frem1Q684R7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frem1Q684R7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frem1Q684R7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frem1Q684R7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.29■■□□□ 1
Frem1Q684R7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.29■■□□□ 1
Frem1Q684R7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Frem1Q684R7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frem1Q684R7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.28■■□□□ 1
Frem1Q684R7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frem1Q684R7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.28■■□□□ 1
Frem1Q684R7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.27■■□□□ 1
Frem1Q684R7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.27■■□□□ 1
Frem1Q684R7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.27■■□□□ 1
Frem1Q684R7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frem1Q684R7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Frem1Q684R7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Frem1Q684R7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Frem1Q684R7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.26■□□□□ 0.99
Frem1Q684R7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Frem1Q684R7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Frem1Q684R7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.26■□□□□ 0.99
Frem1Q684R7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.25■□□□□ 0.99
Frem1Q684R7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Frem1Q684R7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frem1Q684R7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frem1Q684R7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.24■□□□□ 0.99
Frem1Q684R7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frem1Q684R7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Frem1Q684R7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frem1Q684R7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frem1Q684R7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frem1Q684R7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.22■□□□□ 0.99
Frem1Q684R7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.22■□□□□ 0.99
Frem1Q684R7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frem1Q684R7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frem1Q684R7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frem1Q684R7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Frem1Q684R7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.21■□□□□ 0.99
Frem1Q684R7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Frem1Q684R7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Frem1Q684R7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
Frem1Q684R7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Frem1Q684R7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Frem1Q684R7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Frem1Q684R7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Frem1Q684R7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.18■□□□□ 0.98
Frem1Q684R7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Frem1Q684R7 Gm11175-201ENSMUST00000116172 543 ntBASIC21.18■□□□□ 0.98
Frem1Q684R7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Frem1Q684R7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms