Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shc3Q61120 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Shc3Q61120 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Shc3Q61120 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Shc3Q61120 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Shc3Q61120 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Shc3Q61120 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shc3Q61120 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.3■■□□□ 1.8
Shc3Q61120 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shc3Q61120 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shc3Q61120 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Shc3Q61120 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Shc3Q61120 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shc3Q61120 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.28■■□□□ 1.8
Shc3Q61120 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shc3Q61120 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.27■■□□□ 1.8
Shc3Q61120 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.27■■□□□ 1.8
Shc3Q61120 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shc3Q61120 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Shc3Q61120 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shc3Q61120 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shc3Q61120 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shc3Q61120 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shc3Q61120 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shc3Q61120 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shc3Q61120 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shc3Q61120 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shc3Q61120 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Shc3Q61120 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shc3Q61120 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shc3Q61120 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Shc3Q61120 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Shc3Q61120 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shc3Q61120 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shc3Q61120 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shc3Q61120 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Shc3Q61120 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shc3Q61120 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shc3Q61120 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Shc3Q61120 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Shc3Q61120 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Shc3Q61120 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shc3Q61120 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Shc3Q61120 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.12■■□□□ 1.77
Shc3Q61120 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Shc3Q61120 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.1■■□□□ 1.77
Shc3Q61120 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.1■■□□□ 1.77
Shc3Q61120 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.09■■□□□ 1.77
Shc3Q61120 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shc3Q61120 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
Shc3Q61120 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Shc3Q61120 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.07■■□□□ 1.76
Shc3Q61120 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Shc3Q61120 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Shc3Q61120 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Shc3Q61120 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.05■■□□□ 1.76
Shc3Q61120 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shc3Q61120 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Shc3Q61120 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.04■■□□□ 1.76
Shc3Q61120 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Shc3Q61120 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shc3Q61120 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shc3Q61120 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Shc3Q61120 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.02■■□□□ 1.76
Shc3Q61120 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Shc3Q61120 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26■■□□□ 1.75
Shc3Q61120 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Shc3Q61120 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.99■■□□□ 1.75
Shc3Q61120 Zfp131-205ENSMUST00000223812 663 ntBASIC25.99■■□□□ 1.75
Shc3Q61120 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shc3Q61120 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Shc3Q61120 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shc3Q61120 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Shc3Q61120 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Shc3Q61120 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shc3Q61120 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Shc3Q61120 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Shc3Q61120 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Shc3Q61120 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Shc3Q61120 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Shc3Q61120 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
Shc3Q61120 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Shc3Q61120 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.93■■□□□ 1.74
Shc3Q61120 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Shc3Q61120 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Shc3Q61120 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Shc3Q61120 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shc3Q61120 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.91■■□□□ 1.74
Shc3Q61120 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Shc3Q61120 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shc3Q61120 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shc3Q61120 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Shc3Q61120 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shc3Q61120 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Shc3Q61120 Gm9397-201ENSMUST00000200125 605 ntBASIC25.89■■□□□ 1.74
Shc3Q61120 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Shc3Q61120 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
Shc3Q61120 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Shc3Q61120 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.88■■□□□ 1.73
Shc3Q61120 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms