Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Col12a1Q60847 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Col12a1Q60847 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.2■■□□□ 1.62
Col12a1Q60847 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col12a1Q60847 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col12a1Q60847 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col12a1Q60847 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.19■■□□□ 1.62
Col12a1Q60847 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.19■■□□□ 1.62
Col12a1Q60847 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col12a1Q60847 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.17■■□□□ 1.62
Col12a1Q60847 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Col12a1Q60847 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col12a1Q60847 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Col12a1Q60847 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Col12a1Q60847 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.15■■□□□ 1.62
Col12a1Q60847 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Col12a1Q60847 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Col12a1Q60847 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col12a1Q60847 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col12a1Q60847 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col12a1Q60847 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Col12a1Q60847 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.11■■□□□ 1.61
Col12a1Q60847 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col12a1Q60847 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.1■■□□□ 1.61
Col12a1Q60847 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Col12a1Q60847 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.09■■□□□ 1.61
Col12a1Q60847 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Col12a1Q60847 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.09■■□□□ 1.61
Col12a1Q60847 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Col12a1Q60847 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Col12a1Q60847 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Col12a1Q60847 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Col12a1Q60847 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Col12a1Q60847 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Col12a1Q60847 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Col12a1Q60847 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col12a1Q60847 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col12a1Q60847 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Col12a1Q60847 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Col12a1Q60847 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col12a1Q60847 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col12a1Q60847 Gm22567-201ENSMUST00000175542 342 ntBASIC25.01■■□□□ 1.59
Col12a1Q60847 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col12a1Q60847 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col12a1Q60847 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col12a1Q60847 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25■■□□□ 1.59
Col12a1Q60847 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col12a1Q60847 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25■■□□□ 1.59
Col12a1Q60847 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Col12a1Q60847 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.99■■□□□ 1.59
Col12a1Q60847 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col12a1Q60847 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col12a1Q60847 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.97■■□□□ 1.59
Col12a1Q60847 Gm12366-201ENSMUST00000121722 873 ntBASIC24.97■■□□□ 1.59
Col12a1Q60847 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.97■■□□□ 1.59
Col12a1Q60847 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Col12a1Q60847 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.97■■□□□ 1.59
Col12a1Q60847 Gm5786-201ENSMUST00000085368 882 ntBASIC24.97■■□□□ 1.59
Col12a1Q60847 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col12a1Q60847 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Col12a1Q60847 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col12a1Q60847 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col12a1Q60847 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Col12a1Q60847 Gm4799-201ENSMUST00000095396 657 ntBASIC24.93■■□□□ 1.58
Col12a1Q60847 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.92■■□□□ 1.58
Col12a1Q60847 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col12a1Q60847 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col12a1Q60847 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col12a1Q60847 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.91■■□□□ 1.58
Col12a1Q60847 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.91■■□□□ 1.58
Col12a1Q60847 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col12a1Q60847 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Col12a1Q60847 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col12a1Q60847 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.86■■□□□ 1.57
Col12a1Q60847 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col12a1Q60847 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Col12a1Q60847 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col12a1Q60847 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col12a1Q60847 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col12a1Q60847 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col12a1Q60847 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col12a1Q60847 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col12a1Q60847 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.82■■□□□ 1.56
Col12a1Q60847 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col12a1Q60847 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
Col12a1Q60847 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.81■■□□□ 1.56
Col12a1Q60847 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col12a1Q60847 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.81■■□□□ 1.56
Col12a1Q60847 Gm5812-201ENSMUST00000061073 957 ntBASIC24.81■■□□□ 1.56
Col12a1Q60847 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col12a1Q60847 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.8■■□□□ 1.56
Col12a1Q60847 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col12a1Q60847 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col12a1Q60847 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Col12a1Q60847 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.79■■□□□ 1.56
Col12a1Q60847 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col12a1Q60847 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Col12a1Q60847 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col12a1Q60847 Scarna2-201ENSMUST00000157560 414 ntBASIC24.78■■□□□ 1.56
Col12a1Q60847 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms