Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.03■■■□□ 2.24
Rnf20Q5DTM8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rnf20Q5DTM8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rnf20Q5DTM8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Rnf20Q5DTM8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rnf20Q5DTM8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29■■■□□ 2.23
Rnf20Q5DTM8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Rnf20Q5DTM8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
Rnf20Q5DTM8 Gm24970-201ENSMUST00000175582 82 ntBASIC29■■■□□ 2.23
Rnf20Q5DTM8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29■■■□□ 2.23
Rnf20Q5DTM8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rnf20Q5DTM8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rnf20Q5DTM8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.99■■■□□ 2.23
Rnf20Q5DTM8 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.98■■■□□ 2.23
Rnf20Q5DTM8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rnf20Q5DTM8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.97■■■□□ 2.23
Rnf20Q5DTM8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.97■■■□□ 2.23
Rnf20Q5DTM8 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.97■■■□□ 2.23
Rnf20Q5DTM8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rnf20Q5DTM8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rnf20Q5DTM8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
Rnf20Q5DTM8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Rnf20Q5DTM8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Rnf20Q5DTM8 Gm45855-201ENSMUST00000212546 880 ntBASIC28.94■■■□□ 2.22
Rnf20Q5DTM8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Rnf20Q5DTM8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.92■■■□□ 2.22
Rnf20Q5DTM8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Rnf20Q5DTM8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rnf20Q5DTM8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.89■■■□□ 2.21
Rnf20Q5DTM8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Rnf20Q5DTM8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rnf20Q5DTM8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rnf20Q5DTM8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rnf20Q5DTM8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.86■■■□□ 2.21
Rnf20Q5DTM8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.85■■■□□ 2.21
Rnf20Q5DTM8 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.84■■■□□ 2.21
Rnf20Q5DTM8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rnf20Q5DTM8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Rnf20Q5DTM8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rnf20Q5DTM8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rnf20Q5DTM8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rnf20Q5DTM8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rnf20Q5DTM8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rnf20Q5DTM8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Rnf20Q5DTM8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rnf20Q5DTM8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rnf20Q5DTM8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Rnf20Q5DTM8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rnf20Q5DTM8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rnf20Q5DTM8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.77■■■□□ 2.2
Rnf20Q5DTM8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rnf20Q5DTM8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rnf20Q5DTM8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.76■■■□□ 2.2
Rnf20Q5DTM8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.75■■■□□ 2.19
Rnf20Q5DTM8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rnf20Q5DTM8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.75■■■□□ 2.19
Rnf20Q5DTM8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rnf20Q5DTM8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rnf20Q5DTM8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rnf20Q5DTM8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rnf20Q5DTM8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
Rnf20Q5DTM8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
Rnf20Q5DTM8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rnf20Q5DTM8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rnf20Q5DTM8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
Rnf20Q5DTM8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rnf20Q5DTM8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rnf20Q5DTM8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rnf20Q5DTM8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Rnf20Q5DTM8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rnf20Q5DTM8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rnf20Q5DTM8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rnf20Q5DTM8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rnf20Q5DTM8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rnf20Q5DTM8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rnf20Q5DTM8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rnf20Q5DTM8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rnf20Q5DTM8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rnf20Q5DTM8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rnf20Q5DTM8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Rnf20Q5DTM8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.59■■■□□ 2.17
Rnf20Q5DTM8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnf20Q5DTM8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rnf20Q5DTM8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rnf20Q5DTM8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rnf20Q5DTM8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rnf20Q5DTM8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rnf20Q5DTM8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rnf20Q5DTM8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Rnf20Q5DTM8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.54■■■□□ 2.16
Rnf20Q5DTM8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rnf20Q5DTM8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rnf20Q5DTM8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rnf20Q5DTM8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Rnf20Q5DTM8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rnf20Q5DTM8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rnf20Q5DTM8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Rnf20Q5DTM8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.49■■■□□ 2.15
Rnf20Q5DTM8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Rnf20Q5DTM8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms