Protein–RNA interactions for Protein: Q52KE7

Ccnl1, Cyclin-L1, mousemouse

Known RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl1Q52KE7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Ccnl1Q52KE7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccnl1Q52KE7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Ccnl1Q52KE7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.75■■■□□ 2.67
Ccnl1Q52KE7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.74■■■□□ 2.67
Ccnl1Q52KE7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccnl1Q52KE7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccnl1Q52KE7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Ccnl1Q52KE7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccnl1Q52KE7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Ccnl1Q52KE7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.7■■■□□ 2.67
Ccnl1Q52KE7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Ccnl1Q52KE7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Ccnl1Q52KE7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Ccnl1Q52KE7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.69■■■□□ 2.66
Ccnl1Q52KE7 Gm11175-201ENSMUST00000116172 543 ntBASIC31.68■■■□□ 2.66
Ccnl1Q52KE7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ccnl1Q52KE7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccnl1Q52KE7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Mir6538-201ENSMUST00000183713 110 ntBASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Ccnl1Q52KE7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccnl1Q52KE7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.61■■■□□ 2.65
Ccnl1Q52KE7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Ccnl1Q52KE7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Ccnl1Q52KE7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.61■■■□□ 2.65
Ccnl1Q52KE7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccnl1Q52KE7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Ccnl1Q52KE7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Ccnl1Q52KE7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Ccnl1Q52KE7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Ccnl1Q52KE7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccnl1Q52KE7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ccnl1Q52KE7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Ccnl1Q52KE7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.53■■■□□ 2.64
Ccnl1Q52KE7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.52■■■□□ 2.64
Ccnl1Q52KE7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Ccnl1Q52KE7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ccnl1Q52KE7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Ccnl1Q52KE7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Ccnl1Q52KE7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccnl1Q52KE7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccnl1Q52KE7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccnl1Q52KE7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccnl1Q52KE7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.46■■■□□ 2.63
Ccnl1Q52KE7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccnl1Q52KE7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Ccnl1Q52KE7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccnl1Q52KE7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccnl1Q52KE7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccnl1Q52KE7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ccnl1Q52KE7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccnl1Q52KE7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ccnl1Q52KE7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
Ccnl1Q52KE7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Ccnl1Q52KE7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
Ccnl1Q52KE7 Cap2-205ENSMUST00000225824 1634 ntBASIC31.38■■■□□ 2.61
Ccnl1Q52KE7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccnl1Q52KE7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccnl1Q52KE7 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.37■■■□□ 2.61
Ccnl1Q52KE7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ccnl1Q52KE7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccnl1Q52KE7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccnl1Q52KE7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccnl1Q52KE7 Gm6311-201ENSMUST00000073790 878 ntBASIC31.33■■■□□ 2.61
Ccnl1Q52KE7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.33■■■□□ 2.61
Ccnl1Q52KE7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccnl1Q52KE7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Ccnl1Q52KE7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ccnl1Q52KE7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.32■■■□□ 2.6
Ccnl1Q52KE7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.31■■■□□ 2.6
Ccnl1Q52KE7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ccnl1Q52KE7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccnl1Q52KE7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccnl1Q52KE7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.29■■■□□ 2.6
Ccnl1Q52KE7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
Ccnl1Q52KE7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.29■■■□□ 2.6
Ccnl1Q52KE7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Ccnl1Q52KE7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Ccnl1Q52KE7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ccnl1Q52KE7 Gm30023-201ENSMUST00000197970 889 ntBASIC31.24■■■□□ 2.59
Ccnl1Q52KE7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccnl1Q52KE7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.22■■■□□ 2.59
Ccnl1Q52KE7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.22■■■□□ 2.59
Ccnl1Q52KE7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccnl1Q52KE7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccnl1Q52KE7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccnl1Q52KE7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccnl1Q52KE7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccnl1Q52KE7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.19■■■□□ 2.58
Ccnl1Q52KE7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ccnl1Q52KE7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccnl1Q52KE7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ccnl1Q52KE7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccnl1Q52KE7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.18■■■□□ 2.58
Ccnl1Q52KE7 Particl-201ENSMUST00000205370 1560 ntBASIC31.17■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms