Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.75■■□□□ 1.71
B020004J07RikQ3UTC0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
B020004J07RikQ3UTC0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
B020004J07RikQ3UTC0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
B020004J07RikQ3UTC0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
B020004J07RikQ3UTC0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.71■■□□□ 1.71
B020004J07RikQ3UTC0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
B020004J07RikQ3UTC0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
B020004J07RikQ3UTC0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
B020004J07RikQ3UTC0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
B020004J07RikQ3UTC0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
B020004J07RikQ3UTC0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
B020004J07RikQ3UTC0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.67■■□□□ 1.7
B020004J07RikQ3UTC0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
B020004J07RikQ3UTC0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
B020004J07RikQ3UTC0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
B020004J07RikQ3UTC0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.65■■□□□ 1.7
B020004J07RikQ3UTC0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
B020004J07RikQ3UTC0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.65■■□□□ 1.7
B020004J07RikQ3UTC0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
B020004J07RikQ3UTC0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
B020004J07RikQ3UTC0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
B020004J07RikQ3UTC0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
B020004J07RikQ3UTC0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
B020004J07RikQ3UTC0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.61■■□□□ 1.69
B020004J07RikQ3UTC0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
B020004J07RikQ3UTC0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
B020004J07RikQ3UTC0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
B020004J07RikQ3UTC0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
B020004J07RikQ3UTC0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.57■■□□□ 1.68
B020004J07RikQ3UTC0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
B020004J07RikQ3UTC0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.56■■□□□ 1.68
B020004J07RikQ3UTC0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
B020004J07RikQ3UTC0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.55■■□□□ 1.68
B020004J07RikQ3UTC0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.55■■□□□ 1.68
B020004J07RikQ3UTC0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
B020004J07RikQ3UTC0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
B020004J07RikQ3UTC0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
B020004J07RikQ3UTC0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
B020004J07RikQ3UTC0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.54■■□□□ 1.68
B020004J07RikQ3UTC0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
B020004J07RikQ3UTC0 Gm7432-201ENSMUST00000210343 879 ntBASIC25.52■■□□□ 1.68
B020004J07RikQ3UTC0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
B020004J07RikQ3UTC0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
B020004J07RikQ3UTC0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.51■■□□□ 1.67
B020004J07RikQ3UTC0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
B020004J07RikQ3UTC0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
B020004J07RikQ3UTC0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
B020004J07RikQ3UTC0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
B020004J07RikQ3UTC0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
B020004J07RikQ3UTC0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
B020004J07RikQ3UTC0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.49■■□□□ 1.67
B020004J07RikQ3UTC0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
B020004J07RikQ3UTC0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
B020004J07RikQ3UTC0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.48■■□□□ 1.67
B020004J07RikQ3UTC0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
B020004J07RikQ3UTC0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
B020004J07RikQ3UTC0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
B020004J07RikQ3UTC0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
B020004J07RikQ3UTC0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
B020004J07RikQ3UTC0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
B020004J07RikQ3UTC0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
B020004J07RikQ3UTC0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
B020004J07RikQ3UTC0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
B020004J07RikQ3UTC0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
B020004J07RikQ3UTC0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.42■■□□□ 1.66
B020004J07RikQ3UTC0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.42■■□□□ 1.66
B020004J07RikQ3UTC0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.41■■□□□ 1.66
B020004J07RikQ3UTC0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
B020004J07RikQ3UTC0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
B020004J07RikQ3UTC0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
B020004J07RikQ3UTC0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.4■■□□□ 1.66
B020004J07RikQ3UTC0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
B020004J07RikQ3UTC0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004J07RikQ3UTC0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004J07RikQ3UTC0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004J07RikQ3UTC0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
B020004J07RikQ3UTC0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004J07RikQ3UTC0 Gm11599-201ENSMUST00000118720 878 ntBASIC25.38■■□□□ 1.65
B020004J07RikQ3UTC0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
B020004J07RikQ3UTC0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.37■■□□□ 1.65
B020004J07RikQ3UTC0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
B020004J07RikQ3UTC0 Gm30023-201ENSMUST00000197970 889 ntBASIC25.37■■□□□ 1.65
B020004J07RikQ3UTC0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
B020004J07RikQ3UTC0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
B020004J07RikQ3UTC0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.36■■□□□ 1.65
B020004J07RikQ3UTC0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
B020004J07RikQ3UTC0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
B020004J07RikQ3UTC0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
B020004J07RikQ3UTC0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
B020004J07RikQ3UTC0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
B020004J07RikQ3UTC0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
B020004J07RikQ3UTC0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.34■■□□□ 1.65
B020004J07RikQ3UTC0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
B020004J07RikQ3UTC0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
B020004J07RikQ3UTC0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
B020004J07RikQ3UTC0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.64
B020004J07RikQ3UTC0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.32■■□□□ 1.64
B020004J07RikQ3UTC0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
B020004J07RikQ3UTC0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 369.3 ms