Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.27■■□□□ 1.8
Smcr8Q3UMB5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Smcr8Q3UMB5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.26■■□□□ 1.79
Smcr8Q3UMB5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Smcr8Q3UMB5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.24■■□□□ 1.79
Smcr8Q3UMB5 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smcr8Q3UMB5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smcr8Q3UMB5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Smcr8Q3UMB5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Smcr8Q3UMB5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.2■■□□□ 1.78
Smcr8Q3UMB5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smcr8Q3UMB5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smcr8Q3UMB5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smcr8Q3UMB5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smcr8Q3UMB5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Smcr8Q3UMB5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smcr8Q3UMB5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smcr8Q3UMB5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smcr8Q3UMB5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smcr8Q3UMB5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Smcr8Q3UMB5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smcr8Q3UMB5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smcr8Q3UMB5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smcr8Q3UMB5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smcr8Q3UMB5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smcr8Q3UMB5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
Smcr8Q3UMB5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.1■■□□□ 1.77
Smcr8Q3UMB5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smcr8Q3UMB5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Smcr8Q3UMB5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.07■■□□□ 1.76
Smcr8Q3UMB5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smcr8Q3UMB5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smcr8Q3UMB5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Smcr8Q3UMB5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Smcr8Q3UMB5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Smcr8Q3UMB5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Smcr8Q3UMB5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smcr8Q3UMB5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Smcr8Q3UMB5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.01■■□□□ 1.75
Smcr8Q3UMB5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.01■■□□□ 1.75
Smcr8Q3UMB5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smcr8Q3UMB5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26■■□□□ 1.75
Smcr8Q3UMB5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Smcr8Q3UMB5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smcr8Q3UMB5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Gm7432-201ENSMUST00000210343 879 ntBASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smcr8Q3UMB5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smcr8Q3UMB5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Smcr8Q3UMB5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Smcr8Q3UMB5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Smcr8Q3UMB5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
Smcr8Q3UMB5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.95■■□□□ 1.74
Smcr8Q3UMB5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smcr8Q3UMB5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smcr8Q3UMB5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Smcr8Q3UMB5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smcr8Q3UMB5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smcr8Q3UMB5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smcr8Q3UMB5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.86■■□□□ 1.73
Smcr8Q3UMB5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.86■■□□□ 1.73
Smcr8Q3UMB5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Smcr8Q3UMB5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smcr8Q3UMB5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.83■■□□□ 1.73
Smcr8Q3UMB5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.83■■□□□ 1.73
Smcr8Q3UMB5 Gm11599-201ENSMUST00000118720 878 ntBASIC25.83■■□□□ 1.73
Smcr8Q3UMB5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.83■■□□□ 1.72
Smcr8Q3UMB5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.82■■□□□ 1.72
Smcr8Q3UMB5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.82■■□□□ 1.72
Smcr8Q3UMB5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.82■■□□□ 1.72
Smcr8Q3UMB5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms