Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Khdc4Q3TCX3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Khdc4Q3TCX3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Khdc4Q3TCX3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Khdc4Q3TCX3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Khdc4Q3TCX3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Khdc4Q3TCX3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Khdc4Q3TCX3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Khdc4Q3TCX3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Khdc4Q3TCX3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Khdc4Q3TCX3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.96■■□□□ 1.27
Khdc4Q3TCX3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Khdc4Q3TCX3 Nkain2-201ENSMUST00000092602 558 ntBASIC22.95■■□□□ 1.26
Khdc4Q3TCX3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Khdc4Q3TCX3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Khdc4Q3TCX3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Khdc4Q3TCX3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Khdc4Q3TCX3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Khdc4Q3TCX3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.92■■□□□ 1.26
Khdc4Q3TCX3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Khdc4Q3TCX3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Khdc4Q3TCX3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc4Q3TCX3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc4Q3TCX3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc4Q3TCX3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc4Q3TCX3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc4Q3TCX3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc4Q3TCX3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Khdc4Q3TCX3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Khdc4Q3TCX3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Khdc4Q3TCX3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Khdc4Q3TCX3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Khdc4Q3TCX3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Khdc4Q3TCX3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Khdc4Q3TCX3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.87■■□□□ 1.25
Khdc4Q3TCX3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Khdc4Q3TCX3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Khdc4Q3TCX3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Khdc4Q3TCX3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Khdc4Q3TCX3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Khdc4Q3TCX3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Khdc4Q3TCX3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Khdc4Q3TCX3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Khdc4Q3TCX3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Khdc4Q3TCX3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Khdc4Q3TCX3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Khdc4Q3TCX3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.83■■□□□ 1.25
Khdc4Q3TCX3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Khdc4Q3TCX3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Khdc4Q3TCX3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.82■■□□□ 1.24
Khdc4Q3TCX3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Khdc4Q3TCX3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Khdc4Q3TCX3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Khdc4Q3TCX3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Khdc4Q3TCX3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Khdc4Q3TCX3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Khdc4Q3TCX3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Khdc4Q3TCX3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Khdc4Q3TCX3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.79■■□□□ 1.24
Khdc4Q3TCX3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Khdc4Q3TCX3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Khdc4Q3TCX3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Khdc4Q3TCX3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Khdc4Q3TCX3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Khdc4Q3TCX3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Khdc4Q3TCX3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
Khdc4Q3TCX3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
Khdc4Q3TCX3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.75■■□□□ 1.23
Khdc4Q3TCX3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Khdc4Q3TCX3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Khdc4Q3TCX3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Khdc4Q3TCX3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.74■■□□□ 1.23
Khdc4Q3TCX3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
Khdc4Q3TCX3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.73■■□□□ 1.23
Khdc4Q3TCX3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.73■■□□□ 1.23
Khdc4Q3TCX3 Gm7432-201ENSMUST00000210343 879 ntBASIC22.72■■□□□ 1.23
Khdc4Q3TCX3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Khdc4Q3TCX3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Khdc4Q3TCX3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Khdc4Q3TCX3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.71■■□□□ 1.23
Khdc4Q3TCX3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.7■■□□□ 1.22
Khdc4Q3TCX3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Khdc4Q3TCX3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.69■■□□□ 1.22
Khdc4Q3TCX3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Khdc4Q3TCX3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Khdc4Q3TCX3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.69■■□□□ 1.22
Khdc4Q3TCX3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Khdc4Q3TCX3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Khdc4Q3TCX3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Khdc4Q3TCX3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Khdc4Q3TCX3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
Khdc4Q3TCX3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Khdc4Q3TCX3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Khdc4Q3TCX3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.65■■□□□ 1.22
Khdc4Q3TCX3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Khdc4Q3TCX3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Khdc4Q3TCX3 Amer2-203ENSMUST00000225247 2662 ntBASIC22.64■■□□□ 1.21
Khdc4Q3TCX3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Khdc4Q3TCX3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Khdc4Q3TCX3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms