Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Usp9xP70398 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp9xP70398 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Usp9xP70398 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Usp9xP70398 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
Usp9xP70398 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp9xP70398 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp9xP70398 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp9xP70398 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp9xP70398 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Usp9xP70398 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usp9xP70398 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp9xP70398 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp9xP70398 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp9xP70398 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.91■□□□□ 0.94
Usp9xP70398 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp9xP70398 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Usp9xP70398 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp9xP70398 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp9xP70398 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp9xP70398 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp9xP70398 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.86■□□□□ 0.93
Usp9xP70398 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp9xP70398 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp9xP70398 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Usp9xP70398 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp9xP70398 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Usp9xP70398 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Usp9xP70398 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp9xP70398 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Usp9xP70398 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.81■□□□□ 0.92
Usp9xP70398 Gm12366-201ENSMUST00000121722 873 ntBASIC20.81■□□□□ 0.92
Usp9xP70398 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.81■□□□□ 0.92
Usp9xP70398 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp9xP70398 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.81■□□□□ 0.92
Usp9xP70398 Gm5786-201ENSMUST00000085368 882 ntBASIC20.81■□□□□ 0.92
Usp9xP70398 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp9xP70398 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp9xP70398 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp9xP70398 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.8■□□□□ 0.92
Usp9xP70398 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp9xP70398 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp9xP70398 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.78■□□□□ 0.92
Usp9xP70398 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp9xP70398 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp9xP70398 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp9xP70398 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp9xP70398 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp9xP70398 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp9xP70398 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp9xP70398 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp9xP70398 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp9xP70398 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp9xP70398 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp9xP70398 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp9xP70398 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp9xP70398 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp9xP70398 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.72■□□□□ 0.91
Usp9xP70398 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp9xP70398 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp9xP70398 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.72■□□□□ 0.91
Usp9xP70398 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp9xP70398 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp9xP70398 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp9xP70398 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp9xP70398 Gm22567-201ENSMUST00000175542 342 ntBASIC20.7■□□□□ 0.9
Usp9xP70398 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp9xP70398 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp9xP70398 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp9xP70398 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp9xP70398 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Usp9xP70398 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp9xP70398 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp9xP70398 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp9xP70398 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp9xP70398 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp9xP70398 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp9xP70398 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp9xP70398 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Usp9xP70398 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Usp9xP70398 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp9xP70398 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Usp9xP70398 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.64■□□□□ 0.89
Usp9xP70398 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp9xP70398 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
Usp9xP70398 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp9xP70398 Gm4799-201ENSMUST00000095396 657 ntBASIC20.63■□□□□ 0.89
Usp9xP70398 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp9xP70398 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp9xP70398 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp9xP70398 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.61■□□□□ 0.89
Usp9xP70398 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp9xP70398 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp9xP70398 Gm5812-201ENSMUST00000061073 957 ntBASIC20.61■□□□□ 0.89
Usp9xP70398 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp9xP70398 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp9xP70398 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp9xP70398 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp9xP70398 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp9xP70398 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms